Entry |
|
Symbol |
PCDH20
|
Name |
(RefSeq) protocadherin-20
|
KO |
|
Organism |
bbuf Bufo bufo (common toad)
|
Pathway |
bbuf03273 | Virion - Lassa virus and SFTS virus |
|
Brite |
KEGG Orthology (KO) [BR:bbuf00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120995890 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:bbuf01009]
120995890 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:bbuf04515]
120995890 (PCDH20)
Protein phosphatases and associated proteins [BR:bbuf01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120995890 (PCDH20)
Cell adhesion molecules [BR:bbuf04515]
Cadherins
Protocadherins
120995890 (PCDH20)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
3:525932514..525936914
|
AA seq |
894 aa
MGQQAIPTRTSLNHGQHFLFLYLIVPLTGPAICSASYSTASELLYMLHEGLPKGILIGNI
VRDLQLGLFTDPPLSFSLASKGLSGKYVTLDNSTGELYTSAEELDREALCSQNPGVQDCV
LLLDIIILPQEYFRLIKIKIAIIDVNDNAPVFPVAQIYITVPENAPVNTRLVIEHPAYDP
DGGLYGVQTYRLVEYNGVFTLDVEENESGERTPYLIIMGTLDREIKSDYKTIIIAEDGGN
PPLVGSATLSILISDVNDNCPQFSESTINVTIPGNSSVGVKVTTVQAVDIDEGSNAIITY
AFSERVPQSSKELFYLDENTGVIKLFKKVDGNTVQQHKLTVFANGPGCIPAVMNVFISII
KVALRPPEVVPRYIANEENGIVYLKELEPINSPIAFFTIKDPDDKYKVNCYLEGEGPFRL
AAYKTYTNEYLLETTNTLDYETKRTYNISVVALSLDGSKVKKPMQVYILDENDNAPVFTQ
PTIEVTIEENNQANAFLAKLHATDADSGDRGQVSYFLGPDAPAYFSLDKQTGILTVTTML
DREEKEKYRFTVKARDSGKPPRESVATVHITVLDKNDNSPRFISKDFSFFVPENFPGFGE
IGVISVTDADSGQNGWIALSIVNGSDIFVIDTGKRLLRAKVSLDREQQSSYTLWVEATDG
GDPTFSSTAKITILLLDVNDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMN
AVIAYSIIGRRGPRPESFRIDSKTGNITLEEALMRDDYGLYRLLVKVTDHGYPEPLFSTV
MVNLFVNDTVSNESYIENLLRRDPDINIEEKEPQIAIKPTHKKIEADSCVPTLVTLSIFC
LGSVILVTLMAMYICLRKGKKDNRINENLEVQIPLNGKMNFHSIDKKPIEISNI |
NT seq |
2685 nt +upstreamnt +downstreamnt
atggggcaacaagccattccaaccaggaccagcctcaaccatggacagcactttttgttc
ctctacctgattgttcccttaactggacctgcaatttgctcagcaagttacagcacagct
tctgaattgctatacatgctgcacgaagggttacccaaggggattctcattggaaacatt
gtgcgtgatctgcagctgggtctctttactgacccccctctttcattcagcctggcatct
aaagggctaagtgggaagtatgtgacacttgataacagcacgggggagctgtacacatca
gcagaggaattggacagagaagctctttgctcacaaaaccctggcgttcaggactgtgtc
ctcctccttgatattatcattttgccacaggaatattttaggctcatcaaaataaagatt
gccatcattgatgtgaatgacaatgctcctgtgtttccagtggcacagatttatattact
gttccggagaatgctcctgttaacaccaggctggttatagagcatcctgcttatgaccct
gatggaggactttatggagtccagacctacaggttagtggaatacaatggtgtttttaca
ttagacgtggaagagaatgagagtggagagaggacgccttaccttataattatggggact
ctggacagggagatcaagtctgattacaaaactattattattgctgaagatggtggcaac
ccaccccttgtaggatctgccactctttctattctcataagtgatgtcaatgataattgt
ccacagttcagtgaatctacgatcaatgtgactattcctggaaactcaagtgttggtgtg
aaagtaaccacggtgcaagctgtggacattgatgaaggcagcaatgcaataattacgtac
gccttcagtgaacgtgtcccacagtcttcaaaagaacttttctacttggacgaaaataca
ggagtaataaagcttttcaaaaaggtagatggcaacactgttcagcaacataaattaact
gtatttgccaatggcccaggctgcatccccgccgttatgaacgtgtttatttcaattatt
aaggtagctctccgaccacctgaggttgtacctcgctatattgcaaatgaagaaaatggt
attgtgtatttgaaagagttagaacctattaattcacccattgcattttttaccatcaaa
gatcctgatgacaaatacaaggtgaattgttatttagaaggggaaggaccattccgactt
gccgcatacaaaacctataccaatgagtatttacttgagactacaaatactttagattat
gaaacaaaacgaacatataatatttcagtggttgcccttagtctggatgggtctaaagtt
aagaaaccgatgcaagtgtatattttggatgagaatgacaatgcccctgtttttacacag
cccaccatagaagttactattgaagaaaacaaccaggcaaatgcttttttggccaaattg
cacgctactgatgctgacagtggagacagaggacaagtttcctactttttgggacctgat
gcacctgcttatttttctcttgataagcaaacaggaattcttacagttaccactatgtta
gatcgagaggaaaaagagaaatacaggttcactgtgaaagcaagagattctggcaaacct
ccaagagagtcagtagccactgttcatattacagttctagacaaaaatgacaacagccct
cgtttcatcagcaaagatttcagtttttttgttcctgagaactttcctggttttggtgaa
attggagtaattagcgtcacagatgctgactctggacagaatggctggatagccctttct
atagtgaatggaagtgacatttttgtcattgacactggcaaaagactcttgagagcaaag
gtatcacttgatagggaacaacagagttcttatactctatgggtcgaagcaactgatggc
ggtgaccctactttctcgtctacagcaaaaataaccatattgcttctggatgttaatgac
aaccccccactggtcttattcccacagtccaatatgtcctatcttcttgtccttccttca
actctgccgggttctcctgttactgaagtttatgctgttgataaggacacagggatgaat
gcagtcatagcatacagtattataggaaggagggggcctagacctgaatcttttaggata
gattccaaaacaggaaacataaccttagaagaggccctaatgagggatgattatggccta
tataggttattagtgaaagtaactgatcatggttatccagaacctcttttctccacagtt
atggtcaatttgtttgtcaatgatacagtaagtaatgagagctacattgagaacttgctg
aggagagatcctgacattaatatagaagagaaggaaccacaaatagcaattaaacctact
cataaaaagatagaagcagattcctgtgtccctacactggtcactctgtcaatattctgt
ttgggctctgtcattctggtcactttaatggcaatgtatatctgcttgagaaaaggaaag
aaagataacaggataaatgaaaatctggaagttcaaatcccactaaatggcaaaatgaac
ttccattcaatcgataaaaagccaattgagatttccaacatttaa |