Bufo bufo (common toad): 120995926
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Entry
120995926 CDS
T07950
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120995926 (ZC3H13)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120995926 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
120995926
NCBI-ProteinID:
XP_040281375
LinkDB
All DBs
Position
3:complement(550597204..550692508)
Genome browser
AA seq
1632 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGNSAETQCRNWMKTGNCVYGNTCRYI
HGPSPRGKGYSSTYRRSPERPTIDLRDRMKNKRQEVDSEPPKRTAEEQTSPSRKESSRGR
HREKEDIKITKERTPESDEEAAEWDAARDDSENGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVIAKMSPSPRKSSKSPKRKSSPKAGNPTSKKEKKLAAGTS
PPPSELPVRHSKVAQSKKKGPRTPSPPPPTQEEVSLSKKHKDKHKAKERIEERGKDGKER
GREVEKHRDKKDRQRDLSESSHRQKRSPSPAERSRSNSSHSREYSPVPSRRRHTSSPMPV
KSSSHKHISPSRRSVSPARHHSPVSSRHHSPSSQSGSSVQRHSPSPRRRRSPSPHYHRAS
SPSARRSSSSPYATHTSSPQRRRSPSKHRSPVREKGRHERERASASQDRRRDRRDDSRGR
KDKERERDDREPSGSRDHRDERESRDGRDRRDIRDNRDRRETRDTREGREARDSRDYRDT
KENREQKDSRSARDTHDYRERDNRESHRKDDQYDERSYRRSHGKDEASRSDTRNDRNDNR
NESRSEARNDRNGRARGRAPDPPEKGGRGARSSQVDSHSSSSYHDNWDSRSSYTERERYD
NREQGRDSSFDRRHGDRERRERDRDQRVTSPAPHRGRNDDEREERRDDRRVDRSDDRRDD
RAREREREREREREREREREREKERETERERAREREREKEREREREREREREREREERER
ERERERERERERERNHERDRERGRERERERPRDWDEKDKGREDRRDKRDDVRDERNLKEL
HDDRKAKKRHRNDNSPSPRQSPKRRREHSPESDAYNSGDEKNEKHRLLSQVVRPQETRSL
SPTLVTEERSSRWKEEDRKPDRKEGSRRYEEIETKERVSATEKQREHSIDTESLKTKETE
STVQHKTEEREVTEKLHEDKAKKKTLKKAAKKKKEEESAVEKIATEPPPEEAKVFSPKKG
QKKKNLEKKRKKGESDISDEEIVQPAKKKKGPRTPPVTVAPVTAPAVTKEEVVPEVTPDK
MAVETVQSKDSTFSDWSDEDVPERTESSLPDRTIEEPIKKPTKSKHEKDDPRPPCVEEPP
ARKSTEQKRSSSISSNQSRTSSRLRSPSIDSVHRGGDDQAVRRRLLHGTAKDPDRSIEPS
GERKSRIDQLKRGEPSRSTSSGHPVGMQPHISTRHTDQRDSRSHSSRRSSPESDRQVNSR
SGSFDSRERAPERERYEHDRDRDREKERDRVDRRDMRPRDWDRESDKDWPRNRERERLRE
RDRRRDFERDREKLIPDNTEKERARVLDAPSLADQKRSDPKERDGEKSYEATSRNTAVLE
KAEKDTENLQDIVSSRKSEKVESFDGAEEEFSKLDDDQSGDSVAGEEYEPISDGELEEIL
ADDAEKKEDQHEDEKTSDLLDVIDVDWSSLMPKQPKEPRESGAALLKFTPAAVLLRVGIS
KQLAGPDLFNRVKDTCQQAIEKPNEAENLFEHDQGALNMSALLRRQQRAGLLSNLGPCCK
ALCSRRDLQIRKQLVQNEKGTVKQTYSNPPLVDSELLRLSLRLFRRRAGLSQDKTEDCKL
SAVNKQPEVFVS
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatccgacggaaggtcacagtagagaataccaagaccatatcggatagcaca
tcacgtagaccaagtgtttttgaaagacttggacctagcacaggaaatagtgcagagact
cagtgtcgtaactggatgaaaactggtaactgtgtgtatggtaatacttgtagatatatt
catggcccatctccaagggggaaaggttatagcagtacttatagacggtcaccagaacga
cccactatagacttgcgtgatagaatgaaaaataagcgccaggaggtagattcagagcca
ccgaaacgtacagctgaagaacaaacttctccttccaggaaagagtcctccaggggaaga
cacagagaaaaggaagatattaaaattactaaggaaagaactccagaaagtgacgaagag
gctgctgaatgggacgctgctagagacgattcagaaaatggtgatgttaattatgactat
gaccatgaattgtctttggaaatgaaacgtcagaagatacaacgcgagttaatgaaattg
gagcaagaaaacatggaaaaacgtgaagagatcgtaattaaaaaagagatttcacctgaa
gttatagccaaaatgtctccatctccaagaaaatccagcaagtctcctaaacggaagtcc
agtccaaaagctggcaatcctacaagcaaaaaagaaaagaagttggcggcaggaacatca
ccacctccatctgaactaccagtgagacattccaaagtagcacaaagcaagaagaaagga
cctcgcaccccaagtcctccaccacccactcaagaagaagtttctctctcaaagaagcac
aaagataagcataaagcgaaggaacgcattgaggaacgaggaaaagatggaaaggaaaga
ggcagagaggttgaaaaacacagagacaaaaaagacagacagagggacctgtctgagagc
tctcacaggcagaagcggtcaccaagtccagctgaacgctctcgcagcaattcttcccat
tcaagagagtattcacctgttccttcgaggagacgacatacatcttcaccaatgcctgtg
aaatcctcttctcataaacatatctccccttcccgcaggtctgtttctcctgcacgccat
cattcacccgtatcctcaagacaccactctccatcttcacagtcaggctcctctgttcag
agacattctccttctcctcgtcgtcgcaggtctccatcccctcactatcatagagcctcc
tcaccatccgccagacgctcgtcttcctctccatatgctacccatacctcatcgccacag
aggaggaggagtccatccaaacatcgatccccagtcagggaaaaaggaaggcatgaaaga
gagagagcatcagcttcccaagacagacgtagagacaggagggatgatagcagaggaaga
aaggataaggaaagagaacgagatgatcgggagccaagtgggtccagagaccacagagat
gaaagagaatctcgtgacggccgtgatcgtagagacatcagagataaccgtgacaggaga
gagacaagggacaccagggagggccgtgaggctagagatagtcgtgactatagagacact
aaagaaaacagagagcagaaggattcacgttctgcccgtgacactcatgattatagagag
agagacaaccgtgaatcccaccggaaagatgatcagtatgatgaacgcagctacagaaga
agtcacgggaaagacgaagcgtcaagatctgatacaagaaatgataggaatgataaccgt
aatgaatcaagaagtgaggccaggaatgatcggaatggccgagcgcgtggacgtgcacca
gacccccctgaaaaaggtggtcggggggctagaagttctcaggtggatagccacagcagc
agcagttaccatgacaactgggattcaaggagtagttatacagaacgtgaaagatacgac
aaccgtgaacagggtagagattcttcatttgatcgtagacatggggaccgagaacgacgt
gaacgggatagagatcaaagggtgacatctcctgcaccgcatcggggaaggaatgatgat
gaacgagaagaaagaagagatgatcgtagagtggacagatcagatgataggagagatgac
agggccagagagcgtgagcgtgaacgtgaaagggagcgcgagagagagcgggaaagagag
cgagaaaaggagcgggagactgaaagggagagggctcgtgagcgggagagagaaaaagaa
agggagcgagagcgggaaagagagcgtgaaagggaaagagagcgagaggagcgggagaga
gaaagagagcgtgaaagggaacgagagcgagagcgcgaaaggaaccatgagagggaccgt
gagcgaggcagggaaagagagagagaacgccctagagactgggacgaaaaagataaagga
agagaagatcgtagagacaaaagggatgatgtgcgggatgaaagaaatctaaaagagctg
catgatgatagaaaagctaagaaacgacatagaaatgataacagtcctagcccacgccag
tccccgaagcgacgaagagagcattccccagagagcgacgcttataacagtggtgacgag
aagaatgagaagcacagacttctaagtcaagttgtcagacctcaagaaacacgctctctt
agtcccacgcttgttacagaggaaaggtcttctcgttggaaggaggaggaccgtaaacct
gacaggaaggagggatccaggcgttatgaggagatagagactaaagagcgggtatctgct
actgaaaaacagagggaacactcaatagatactgaaagtctgaagaccaaagagacagag
agcactgtacagcataagacagaagaaagagaggttactgagaaactacatgaagataaa
gccaagaagaaaactctaaagaaagctgcaaagaaaaagaaagaggaagaatctgcagta
gaaaaaattgcaacagaacctccaccagaggaagctaaagtattttcccccaagaagggc
caaaaaaagaaaaatttggagaaaaagcgaaagaaaggcgaatctgatatctctgatgaa
gaaattgtccagcccgccaagaagaaaaaggggcctagaacacccccagttacagttgcg
ccagtcacagccccggcagttaccaaggaggaagttgttccagaggtgaccccagacaag
atggctgttgaaacagtccaatcaaaagattccacattcagtgactggtcagatgaggat
gttcctgaaagaacagaatcttcacttcctgacagaactatagaagaacccatcaaaaag
ccgaccaagagtaaacatgagaaagatgatccgcgaccaccatgtgtggaagaacctcca
gctcgcaagtccactgagcagaaacgtagcagtagtatatccagtaaccagagccgtaca
tcaagccgtctacgctcaccgtccattgactctgtccaccgcggtggggatgaccaggct
gttaggaggagactattgcatggcactgctaaagatccagatagaagcatcgaaccttct
ggagagcgaaaatccagaattgatcaactgaaaaggggagagccgagccgcagcacttct
tcaggacacccagtcggcatgcagccacacatctcaacacggcatacagatcaaagggac
tccagaagtcacagttcgagaaggagttcacctgagtctgaccgtcaagttaattccagg
tccgggtcatttgacagccgagagagagcacctgaaagagagagatacgaacatgatcgg
gacagagacagagaaaaggaaagggaccgtgtggacaggcgggatatgagaccgagagac
tgggacagagaatctgataaggactggccacgaaatagagagcgagagcggctgcgagaa
agagaccggaggagagactttgaaagagacagggagaaattaattcctgacaatacagag
aaagagagagctcgagtccttgatgccccctctttagcagatcaaaaacgtagtgaccca
aaggagagagatggtgaaaaaagttacgaggccacaagtcggaacacagctgttctggag
aaggcagaaaaagatacggaaaacctccaagatattgtcagtagtcgcaaatcagaaaaa
gtggagagttttgatggcgctgaagaggagttttccaagctcgatgatgatcagtctggg
gactctgtggctggagaagaatatgagcccatcagtgatggagagctggaagagattcta
gctgatgatgctgagaagaaggaagaccagcatgaggatgaaaagacatctgatcttttg
gatgtgattgatgttgactggtccagtttgatgcccaagcagccaaaggagcctcgagaa
tccggtgcagctttgttaaaattcactcctgccgcagttttgctgcgtgttggcatctcc
aaacaattagcaggaccagatctgttcaacagggttaaagacacttgccaacaagcaata
gaaaagcctaatgaagctgaaaacctatttgaacatgatcagggagcactgaatatgtcc
gcactgttaaggaggcaacagcgagccggcttactaagtaatcttggaccatgttgtaaa
gctctgtgttctagacgggacctgcaaattcggaagcagcttgtacaaaatgagaagggc
actgtgaaacagacgtattcaaatcctcctttggttgacagtgaacttctaaggctgagc
ttgcgtcttttcagaagaagggctggcttaagtcaggataagactgaggactgcaaactt
tctgccgtgaataagcagcctgaagtttttgtttcataa
DBGET
integrated database retrieval system
