Bufo bufo (common toad): 120995985
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Entry
120995985 CDS
T07950
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120995985 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120995985 (SMARCC2)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120995985 (SMARCC2)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120995985 (SMARCC2)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120995985 (SMARCC2)
PBAF complex
120995985 (SMARCC2)
GBAF(ncBAF) complex
120995985 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Chromo
Motif
Other DBs
NCBI-GeneID:
120995985
NCBI-ProteinID:
XP_040281496
LinkDB
All DBs
Position
3:562956577..563057825
Genome browser
AA seq
1189 aa
AA seq
DB search
MAVRKKDGGPNVKYYESSDTISQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPMKCFLDFKVGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMNIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHVVVP
VPGSLEEEEWVRPILKRDKQVLLHWGYYPDSYDTWIPSSEVEAPVEDAPTPEKPRKVHAK
WILDTDLFNEWMNEEDYEVIDERSTVTRRKKISAKTLTDEVRSLLQTDLVEVSSPDSDRR
DKKGPNNKKRKRSPSPPPSAEAKKKNVKKGPTTPYNKSKRGHRDEEQEDLTKDMDEPSPV
PNVEEVTLPKAVNTKKDSESAPVKGGTVTDLDEQEDESMDAITKEEEENSTVIKSEQVKT
SDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFM
IDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTS
HFHVLADTPSGLVPLQTKTPQTSASQQMLNFPDKNKEKPTDLQNFGLRTDMYSKKNTTSK
SKSAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE
DSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPAA
LVEAHVRKVEDAAKMTGKADPSYGLESSGIAGTTFEENERIDGDTESRGPPCINKENSTE
EPPPEPQPTEEKKEPKDSPSESVSEDDTKERISDVTKKEDDKNKDDTDKDSDKSDVDMAD
GEKVSDSKEGSEETDKEETEVKNKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEL
RARQQHFQQIQSQHQQQHQTPPAGQPVPPVAHSIPVPQQSVTPGPGNSANSSEGIVQPNI
PSAQPPVNSQQQGATQPSPAHSSGAYTVQPTPSPMIPTAVPVPSQPPVPGNQYPSMPLPV
PFNMGSDLVDSLHHNPSTNPYSIHHSMHGTFPPTACRVGGAPPLTHNPAITMSPAPPNLP
SSLGSAASHSPAIVAAMQGGSAITSSPVSDPATSLPPESMGNTVAPAQQ
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggcccgaacgtgaaatattacgagtcctctgacacc
atttctcagttcgacaacgtgcggctatggctggggaaaaactacaagaagtacatccag
gcagagccccccaccaataagtctctgtccagcctggtggtccagctcctgcagttccag
gaagaagtgtttggaaagcatgtcagcaatgctcctcttaccaaattgccgatgaaatgc
ttcctggatttcaaagtgggtggagctctttgtcatatcctcgctgctgcttataaattt
aagagtgaccaaggatggcgtaggtttgatttccagaacccttcacgcatggatcgtaac
gtagaaatgttcatgaacattgagaagtctcttgtgcagaacaactgtctttcccgacca
aatatataccttcatccagacatagactcgaaactgcagagcaagctgaaagacattgtg
aaaagacaccagggcacagtaactgaggacaaaagtcatgcatcccatgtcgtggttcca
gttcctggctccttggaggaagaggaatgggtgagacccatactgaagagagacaagcag
gttcttcttcactggggttattatccagatagttatgacacttggattccatctagtgag
gtagaagctccagttgaggatgcacctaccccagaaaagccccgcaaggtccatgccaag
tggattcttgacactgatctctttaatgagtggatgaatgaagaagattatgaggtgatt
gatgagaggagtacagtgacacgccgcaagaagatctctgccaagaccttgactgatgaa
gtgagatcattgctccaaactgatctagtagaggtaagcagtcctgactcagatcgcagg
gacaagaaaggacctaataataaaaagaggaaacgttctccttcaccacctccgagtgca
gaggcaaagaagaagaatgtcaagaagggaccaactactccttataacaagtcaaaaagg
ggtcatcgcgatgaagaacaggaggatttgacaaaagatatggatgaaccttccccagtg
cctaatgtagaagaagttacgctgccaaaagcggttaataccaagaaagattctgagtcg
gccccagtgaaaggtggcaccgtgactgacctagatgaacaggaagacgagagtatggac
gctataactaaggaagaagaagagaactctacagtgatcaaaagtgaacaagtgaaaacc
tctgaccttcatgaggataatgtaactgaacaaacacaccacattatcatccccagctat
gctgcatggtttgattataacagcgtacatgccattgagcgtagagcactacctgagttt
ttcaatggcaagaacaagtctaaaactccagagatatatttagcatatcgaaacttcatg
attgacacgtatcggctcaaccctcaggaatacctcacttcaacagcgtgccgtcggaac
ctggcaggggatgtttgtgccattatgagggttcatgccttcttggaacagtggggtcta
atcaactatcaggttgatgctgagagtcgcccaacacccatgggaccaccacctacttct
catttccatgttttagctgataccccatcagggctggtaccactgcaaactaaaacacca
cagacctctgcttcacaacagatgctgaatttccctgacaagaataaagaaaaaccaact
gacctacaaaattttgggcttagaactgatatgtacagcaagaagaacacaacttccaag
agtaaatctgctgcaagtgccacgagggagtggacagaacaagagactctactacttctt
gaggctctagaaatgtacaaggacgactggaacaaggtgtctgaacacgttggcagccgt
actcaagatgaatgtattttgcacttccttcggctgcccattgaagatccttatttggag
gactctgaagcatcacttggtcctctggcctttcaacctataccattcagccaatctggt
aacccagtaatgagcacagtagctttcctagcctctgtggtggaccctcgtgtggcatct
gctgctgccaaatctgctcttgatgagttctccaagatgaaggaagaggttcctgcagca
ttggtggaagctcatgttcgcaaagtggaagacgctgccaaaatgacgggtaaagctgac
cccagttatggacttgagagcagtggtattgctggaacaacctttgaagaaaatgagcgg
atagatggggacacagaaagcagagggcctccgtgcataaacaaggagaatagtacagaa
gagccccctcctgaaccacagcctacagaggaaaagaaagagccaaaggattctcccagt
gaatcagtctccgaggatgacacaaaggagcgcataagtgatgttacgaaaaaagaagat
gataagaacaaagatgacacagataaggactcagacaagagtgacgttgatatggctgat
ggagaaaaagtttctgacagcaaagaaggatcagaagaaaccgataaggaagagactgaa
gtaaagaataaggtagaaagagacattggagaaggcaacctgtccacagctgctgctgct
gctctggcggctgctgctgtcaaagctaagcacctggcagcagtggaggagcgcaagatc
aagtccctggtggctctgctagtggagacccagatgaagaagctggaaattaaactgagg
cactttgaagagcttgaaaccatcatggacagagagagggaagcacttgaataccaacga
caacagcttctagcagacagacaatcatttcacatggagcagttgaaatatgcagagctg
agggcccgtcagcagcacttccagcagattcaaagccaacaccagcagcaacaccagacc
cctcctgctggtcagcctgtgccaccggttgctcactctatcccagtgccacagcagtct
gtcacacctgggcctgggaattcagcaaacagttcagaggggattgttcagccaaatata
ccttcagcgcagccaccagtgaatagtcagcagcaaggagcaacacagcccagtccagca
catagttctggtgcatacacagttcaaccaactcctagcccaatgatcccaacagcagtg
ccagttccttcccagccaccggtgcccggtaatcagtaccccagcatgcctctgcctgtt
ccatttaatatgggtagtgacttagtggactctcttcatcacaacccttcaactaacccc
tactcaattcaccattccatgcatggcaccttccctccaacagcatgccgtgttggtggg
gcacctccacttacacataaccctgccataactatgtctccagcccctcctaacttgcca
tcctccctgggttcagctgcatctcatagccctgccatcgtagccgcaatgcagggaggc
tctgccatcacttccagtcctgtttcagatcctgcaacatctctgcctccagaatccatg
ggaaacacagttgctcctgcccagcagtaa
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integrated database retrieval system
