KEGG   Bufo bufo (common toad): 120996001
Entry
120996001         CDS       T07950                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf04137  Mitophagy - animal
bbuf04144  Endocytosis
bbuf04145  Phagosome
bbuf04148  Efferocytosis
bbuf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120996001 (RAB5B)
   04145 Phagosome
    120996001 (RAB5B)
   04137 Mitophagy - animal
    120996001 (RAB5B)
   04148 Efferocytosis
    120996001 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120996001 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bbuf04131]
    120996001 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bbuf04147]
    120996001 (RAB5B)
   04031 GTP-binding proteins [BR:bbuf04031]
    120996001 (RAB5B)
Membrane trafficking [BR:bbuf04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120996001 (RAB5B)
 Endosome - Lysosome transport
    120996001 (RAB5B)
Exosome [BR:bbuf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120996001 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   120996001 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   120996001 (RAB5B)
  Exosomal proteins of melanoma cells
   120996001 (RAB5B)
GTP-binding proteins [BR:bbuf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120996001 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 120996001
NCBI-ProteinID: XP_040281525
LinkDB
Position
3:complement(564211197..564266425)
AA seq 215 aa
MAGRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALSGNKADLTNKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKNEPQNTIGAPGRSRGVDLHEQTQQNRSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccgggagaggagcagcgaggccaaacggtcagtctcaggccagtaagatctgtcag
tttaagttggtattgctcggtgaatctgcggtcggcaagtcaagtctggttctacgtttc
gtcaaaggacagtttcatgaattccaggagagcacaataggagctgcatttcttacacag
tctgtttgtctggatgacactacggtaaaatttgagatctgggatacagcagggcaagaa
cggtatcacagcctggcacccatgtactatcggggagcacaagctgcaattgtggtgtat
gacatcaccaaccaggagacgtttgccagagcgaagacatgggttaaagagctgcagaga
caagccagtccaaacattgtcatagccctttctggcaacaaggctgacctcactaacaag
cgtatggtggagtatgaagaagcccaggcgtatgcagatgataacagtctgttatttatg
gagacatccgccaagacagccatgaatgtcaatgatctgtttcttgcaatagctaagaag
ctgccaaaaaatgagccccagaacacaatcggggctcctggccggagccggggcgtggat
ctccacgagcagacacagcagaacaggagccagtgctgcagcaattaa

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