Bufo bufo (common toad): 120996321
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Entry
120996321 CDS
T07950
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120996321 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120996321 (PAN3)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120996321 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
120996321 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
120996321
NCBI-ProteinID:
XP_040282106
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Position
3:complement(635157151..635218135)
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AA seq
786 aa
AA seq
DB search
MNSGLPPTPSAVVAAPGPPQLPPMGGPGVKLKFCRYYAKDKTCFYGDECQFLHEEPLGIH
GNSLVGYPPLPGPVTPAACKKLELGGLDGPRLTIPGIDGGPLPDSSLTDSYFSTSFIGMN
GFGSPAEASYPRMQRMTNSSSSPSLLNDSAKPYTGHDPLGSPASTLFNDFAGLSISQRRK
TPNPTASEFIPKGGSTSRLSNMSQSNMSAFSQALFSHPSMAGPAAAGLAPGMSLSAGSSP
LHSPKITPHTSPAPRRRSHTPNPATYMVPTSASTPVTNSVSQPPSAGQVIQKETVGGTTY
FYTDTTPVPLTGMVNAVFPNYHIYPPTSPHVAYMQPKANAPSFFMADELRQELINRHLIT
MAQIDQADMPSVPAEVDSYHSLFPLEPLPPPNRIHKSSNFGYITSSYKAVNSKDDLTYCL
RRVHGFRLVNTKCMSLVDTWKKIQHSNIVTLREMFTTKAFGEHSLVFAYDFHAGAETMMS
RHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRV
MDPTKILITGKTRLHVNCVGIFDVLTYDGSQSNPVALMPQYQQADLISLGKVVLALSCNS
LAGIQRENLQKAMELVNINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQ
MRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPSWSETGDRYLLKLFRDHLFHQ
VTEAGTPWIDLSHIVSCLNKLDAGVPEKISLISRDEKSALVVTYSDLKRCFENTFQELVA
SANGQL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcggactgcccccgaccccctccgcggtggtggcggctcccgggccgccccaa
ctgcctcccatggggggacccggggtgaagctgaagttctgccgttactacgcgaaggat
aagacgtgcttctacggggacgagtgccagttcctacacgaagagccgctgggcatccat
ggcaacagcctggtggggtacccgccgctgccagggcctgtcaccccggcggcgtgcaag
aagctggagctgggaggactggacgggccgcggctgaccattcctggaatagatggaggg
cccttaccggactccagtcttacagattcttacttcagtaccagctttattggaatgaat
ggctttggaagcccagcagaggcaagctacccacggatgcagcgaatgacaaacagcagc
agttccccaagccttctgaatgacagtgccaagccatacacaggccatgatcctttaggc
tctccagcttctactctctttaacgactttgctggtctcagcatttctcaaaggcgaaag
acacccaaccccactgccagcgagttcatccccaaaggaggatccacttcccggttgagt
aatatgtctcagtccaacatgtctgccttctctcaagcgttattctcccacccatccatg
gcaggtcctgctgcagccggtctagctccaggcatgtcactgtctgctgggtcttcccca
cttcattctcctaaaataacaccccacacatcaccggctccaagacgacgaagccacacg
cccaacccagccacttacatggtgcccactagtgcctcaacaccagtgaccaactccgtc
tcccagcccccatctgcaggacaggttatccagaaagaaactgttggcggaacaacgtat
ttctacaccgataccactcctgtgccactcactggaatggtaaatgcagtttttccaaat
tatcacatctacccaccaacttctcctcatgttgcttacatgcagcccaaagcaaatgca
ccttccttcttcatggcggatgaactcagacaggaactgatcaaccgacatttgataacg
atggcacagattgaccaagcagatatgccttccgtacctgcagaggttgatagctaccac
agccttttccccctggaaccgcttcctcctcccaacagaatacacaagtccagtaacttt
ggatatattacttcatcctacaaagctgtaaatagcaaggacgacctgacgtattgcctg
agaagagttcatggttttcgtctggtgaacacaaaatgcatgtctctggttgacacgtgg
aagaaaatccagcactccaatatcgttaccttacgagaaatgtttacaaccaaagcattc
ggagagcattccttggtttttgcctatgacttccacgctggcgcagagaccatgatgagc
aggcattttaatgatcccagcgcagacgcttactttactaaaaggaaatggggccagcat
gatggtcctttgccgcgtcaacatgctgggttgctgccagagtccctgatttgggcttac
attgtccagctgagctcagcactgcgaaccatccacactgcaggcctagcgtgtcgcgta
atggatccaacgaagattctgatcactggaaaaaccaggctgcatgtcaactgtgttggg
atttttgatgttttaacctacgatggcagtcagagtaatcctgtagccctaatgccccaa
taccagcaagcagacctgatctcattaggaaaagttgtgctggcgttgtcctgcaattct
ttggctggaatccaacgggaaaatctgcaaaaagcaatggaactcgtgaacatcaactac
tcctctgacctaaagaatctaatcttatatttgctgacagaccaaaaccggttgcgtagt
gtaaatgatatcatgccaatgatcggtgctagattttatactcaactggatgcagcacaa
atgcggaacgatgtcatagaggaggaccttgcaaaggaggtgcagaatggaagattgttc
agactcttggccaaactgggaacaataaatgagagaccagaatttcaaaaagacccatct
tggtcagaaactggtgacaggtatttgctgaaactctttcgggatcatcttttccatcaa
gtgacagaagcgggcactccctggattgacctcagtcatattgtatcttgtcttaacaag
ttagatgctggcgtgcccgagaagattagtctcatatccagggacgagaagagcgcactt
gtagtaacgtacagtgatctaaaacgctgctttgagaatacgtttcaagaactggtagcg
tcggcgaacggtcagttgtag
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