Bufo bufo (common toad): 120996354
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Entry
120996354 CDS
T07950
Symbol
IFT88
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bbuf03037
]
120996354 (IFT88)
Cilium and associated proteins [BR:
bbuf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120996354 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_14
TPR_16
TPR_19
TPR_6
TPR_8
ANAPC3
TPR_11
TPR_10
ARM_TT21_5th
TPR_17
ARM_TT21_4th
TPR_Slam
TPR-S
TPR_MalT
ARM_TT21
HAT_PRP39_C
HEAT_Nup120
TPR_15
DUF2225
ARM_TT21_2nd
RPN7
Consortin_N
MIT
Motif
Other DBs
NCBI-GeneID:
120996354
NCBI-ProteinID:
XP_040282155
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Position
3:complement(644131461..644205907)
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AA seq
825 aa
AA seq
DB search
MRHVHLATEEDEEDLYSGYNDYNPTYDTEDLDNDVAFQQAVKTSHGRRPPITAKVPGTAA
VRPLGTGFGPRVTLSSSMGRPMTGAVQDGAARPMTAVRAAGYTKAAFRGSSFDPLGQSRG
PAPPLEAKNEDTPEEKIRQLEKKVNELIEESCIANSSGDLKQALEKAKEAGRKERVLVRQ
REQILSPENINLDLTYSVLLNLASQYSANEMYAEALNTYQVIVKNKMFSHAGRLKVNMAN
IYLKQKNYSKAIKFYRMALDQIPGAHKEMRIKIMQNIGVTFVKTGQYADAINSFEHIMMX
ISKSDAGFNLILCYFAVGDRDKMKKAFQKLIAAPLGIDDEDKYISPGDDPHTNLLIEAIK
NDSLHQMERERKELAEKYIMTAAKLIAPVIETSFDVGYDWCVEVVKTSQYVELANDLEIN
KALTFLKQKNFSQAVETLKMFEKKDSRVKSAAASNLSFLFFLEKDFSQADLYADLAVTSD
RYNPSALTNKGNSVFVSGDYEKAAEYYREALRNDSSCTESLYNLALTYKKQNRLEDALDC
FTKLHAILRNSGQVVSQMANLYEMLDDPNQAIEWLLQLINIVPTDAHALAKLGELYDMQG
DKLEAFHFYCESYRHFPSNIEVIEWLGAYYIDKKFCEKAVKYFERAALIQPTQVKWQLML
ASCHRRSGNYQKSLDKYKEIHQRFPDNVECLRFLVRLCTDIGLKEVQEYTTKLKKAEKMK
ELKEQRVKSGRDGSARSRREGREGSASSDSGQSSGTNAKGERLSAQLKSLPTANDPYETS
TNQEIDVSYADPLGPQMERPKTAAKKRVEEEEFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacgttcatctggcgactgaggaggatgaagaggatttatattctggttacaat
gattacaatcccacctatgacactgaggatttagacaacgatgtggcttttcagcaggct
gtcaagactagtcatggtcggagacccccgattacagccaaagtaccaggaactgctgca
gtacggccactgggaacaggatttggtcctagagtgaccctttcttcatccatgggaagg
cctatgactggggctgttcaggatggagcagctcgaccaatgacagctgtgcgtgcggct
gggtacactaaagcagcatttcgaggctcttcttttgatcccctgggtcagtctcgaggg
cctgctccacctctggaggccaagaatgaagacacaccagaagaaaagataagacagctg
gagaagaaggttaatgaattaatagaagaaagttgcattgcgaacagcagtggagattta
aagcaggccctggaaaaggctaaggaagccgggaggaaggagagggttttggtcagacag
agagaacagattctgtccccggagaatattaacctggatctcacctactctgtcctgctt
aacttggcatcccagtattctgcaaatgaaatgtatgctgaagcgctcaatacttaccaa
gtcattgtgaagaataaaatgttcagtcacgcaggtcgcctaaaagtgaacatggcaaac
atctatctaaagcagaagaactactccaaggcgatcaagttttatcgtatggctcttgat
caaatcccaggtgcccacaaggagatgaggatcaagataatgcagaatatcggagtgacc
ttcgtcaagaccggtcagtacgccgacgctattaactcctttgagcacatcatgatgtga
atctccaaatctgatgctggtttcaatttgatcctatgttactttgctgtcggagaccga
gacaaaatgaaaaaggctttccagaagttaatagcagcgcctcttggtattgacgacgaa
gacaagtatatttctcctggtgatgaccctcatacaaatttattgatagaagctattaaa
aatgacagtctccatcaaatggaacgagaaaggaaagaattggctgaaaaatacattatg
actgcggccaagttgatagcacccgttattgaaacctcgtttgatgttggctatgactgg
tgtgtggaggtggttaagacgtcacaatatgtggaactggcgaacgatttggagattaac
aaagctcttactttcctgaaacaaaagaacttttcccaggctgtagaaactttaaaaatg
tttgagaaaaaagacagcagagtaaaaagtgcggcagcatccaacctttcattccttttc
ttcctggaaaaagacttctcacaggctgatctgtatgcagatttagcggttacctctgat
cgctacaatccatcagccctgacaaacaagggtaattccgtttttgtaagcggagactat
gaaaaagcagccgaatactacagggaagctctgaggaacgactcgtcctgcacggaatca
ctctataaccttgctttgacgtacaagaaacaaaatcgcctggaggatgctctggactgt
tttactaaactccatgcgatcctgaggaacagtggacaggttgtcagtcagatggcaaac
ttgtatgaaatgcttgacgatcctaatcaggcgatcgagtggctcttacaacttataaac
attgtaccgactgatgcgcacgcacttgctaaacttggagaactgtacgatatgcagggc
gacaagttagaagcattccatttctactgtgagtcttatcgccacttcccatcaaacatt
gaagtgattgaatggctgggagcctactacattgacaaaaagttttgtgaaaaagccgtt
aagtactttgagagagctgcacttattcaaccaactcaagtgaaatggcaattaatgttg
gcaagctgtcacagaagaagcggcaactatcagaaatcgctggataaatacaaggagatt
catcagaggttcccagacaatgttgaatgcttgcgtttcctggtgcggctctgcacagat
attgggttaaaagaagttcaagaatatacaacaaagttgaaaaaggcagagaaaatgaag
gaattaaaggaacagcgtgtaaaatctggcagagatggcagtgcccgcagtcgaagggag
ggcagagagggcagtgcaagcagtgacagtgggcagagcagtggcaccaacgctaaagga
gaacgtcttagtgctcaactaaagtcactcccaacagctaatgatccttatgagaccagc
acgaaccaagaaattgatgtttcctatgcagaccctctcggcccacaaatggaaagacca
aaaactgcagccaagaagagagtggaagaggaagagtttgcagatgaagagttaggagat
gaccttctccctgaataa
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