Bufo bufo (common toad): 120996624
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Entry
120996624 CDS
T07950
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120996624 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120996624 (NUP98)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120996624 (NUP98)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120996624 (NUP98)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120996624 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120996624
NCBI-ProteinID:
XP_040282604
LinkDB
All DBs
Position
3:699577021..699608365
Genome browser
AA seq
1764 aa
AA seq
DB search
MFNKSFGTPFGGGTGAFGATSTFGQTAPGFGTSTATGFGPSTFGTINNTGGLFGSTQNKP
GGLFGTGTFNQTATPSTNTGFGFGTSTGTTNSLFGATNTGGGLFSSQSNAFGQTKPSTFS
SFGTGTNSTSLFGSTQTTANPFGGTSSTLFGTSTFSAAPTGTTIKFNAPSGTDTMAKGGV
TTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNPVAAATGTSLFGASTATSSAP
TGLFGATPSSSNFSFGNKNAFGQTTSTFGANTGGLFGQPAAQPATSLFNKPFGQATTTQN
TGFSFGNTNTLGQASTMGLFGSTQPTQSTGLFGTSTSTNAGSAFGAGAGLFGQTNATPFG
GVGSSTLFNTKPAGFGTTTTSAPAFGTASGGLFGFGANNTGSSLFGNKTAPGTLGAGLGT
GFGQGLNTGQTSLFGSNQPKLGGTLGTGTFGSTGFNAANAGLGFGGPQAPVALADPNAAA
QQLVLQQQLTALAYSPYGDSPLFRNPISDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATKVRPKALQTAGTAKTQLFDGLDDDEPSLSSGAFMPRKSIKKLVLKNLNISNLASPSRS
EQDEASSPARYPENDDGVHEHNGPEVDGHDEVSEFYPPPPSKLLPQSLEKKRMNSGMDDT
IVALNMRNALRNSLDGSAEESSLTEEDILHDVPPHPAGIVLTREGYYTIPSMEELAKMID
EDGKCFVEGFTVGRRGYGSIYFEGLVDLTNLNLDEIVHVRNKEVIVYTDDGNKPPVGEGL
NRAAEVTLNEVWPIDKTTRSLIKSPERLEEMNYKSKLEAASRKQGAQFKEYRPETGSWVF
KVKHFSKYGLQDSDEEEEDATSTAETKKMKAAALPPPGQQPPQQQAVLTGRPTPPPQSLA
EEELGRVLELDSDMADITQEPLLDSAADDQDTTEEQEPVSASSHIASSLGVNPHALQVMK
ASLLLEDEGGDLVSPFSCFRPDTPQEMRSPLRFVPAAQSPRASSGRLQSRFSGPSGLKQK
DSPLLSQSPKPPSSAPWPALGPLSSAFMMPSPVPETQLRTVGTRRQQGLVPLEKSVSDGK
GKLLIDMSLFMGRSFSVGWGQNWTLAHSGDVLSGEREEAAGDTETMDYGFLPKPVSAKSL
TETPFKVHLEKLSLEEKTTDLQSYLIPLEIALKNSTVQSERCPRLVPNPGNSAIHDYAGW
VGEFCAEPAHVEPVVKQWCLTWTLCKALWGRLRELETGLDDLNEYVERLHRRKAFSHWLA
ETAAERIEEEAALHLHERPVQAVFSFLTGCRISEACRLAQKSGDHRLAMLLSQLVGSQQV
VELNVMQLVDWRNLQVDAFIQEERLKIYALLSATPVWQSSDKRSINVCSELDWKRALAVH
LWYMLPPTASISQALQQYETAFQESGEGTRYAAYPLPDYLEGHGLRLEAIDADTSAIKRD
VCFHLLKLYSDRCYDLRQLLDPRSVTPDPLDYRLSWHLWMVLQALNYTHLSEQSQGLLHA
SYTEQLENVGLWEWAIFVLLHVPNAVIRETSVRELLNRHCALRETLETLTKEKFLIEKLC
IPAEWIYEAKAIRARREGDHHREALYLLRAGHWNQCHRLVCRHLASDAIINENYSYLRSF
LDELSRPENCAHIQGWDTAGQVYMDYIGVVEMLNHIRQNESSGCELERLHTKVTSVCNRV
DQIQCCNSKDRLAQSEMAKRVANILRVVLRLQHSPDSDDSELPRVPLRLLAPHIGRLPMP
EDYALEELHSLTQSYLRELTVGGQ
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatccttcgggactccttttggaggtggcactggagcttttggagcaaca
tcaactttcggccaaacagctcctggtttcggtacatcgactgctaccggcttcgggcct
tcaacctttgggacaatcaacaacactggtggcctttttgggagcacccagaataaacca
ggtggactcttcgggaccgggaccttcaaccagacagcaaccccctccacaaacacaggg
tttggctttgggacatcaacgggtacaacaaactccctatttggggccacgaacacagga
ggcggcctcttctcctctcagagcaatgcattcggtcagacgaagccgtccaccttcagc
agctttgggacgggcacaaacagcactagcctttttggtagcacacaaaccactgcgaac
ccctttggaggaacgtcaagcacactttttggaacctctacgttctctgcggctccgacc
ggaaccaccataaagttcaatgcaccttctggaacagacaccatggcaaagggcggtgtt
accacaaacatcagtaccaagcaccagtgcatcaccgccatgaaggagtacgagagcaag
tcgctagaggagctgcgtctggaagattatcaggccaacagaaaggggccccagaatccg
gtggctgcagcgacaggtaccagcctatttggggcatccacagccacatcgagcgccccc
acaggcctgtttggcgccacgccctccagcagcaacttttcatttgggaacaaaaatgcc
tttggacaaactaccagcacctttggagcgaacacaggaggtcttttcggccagcccgcc
gcccagccggccactagcttatttaataagcctttcggccaagctaccaccacgcagaac
accggcttttcgtttggaaacacgaacacgctggggcaggcgagcacaatgggtcttttt
ggaagcactcaacccacccagtccaccggcctctttggcacttccaccagcactaatgca
ggatcggcgtttggagctggggccggtttgtttggacagactaacgccacgccgttcgga
ggtgttggaagttcgaccctgttcaataccaagccagctggatttgggacgaccacgacc
agcgcccctgcgtttggcaccgcttccggaggactcttcggtttcggcgccaataatacc
ggcagcagtctctttgggaataagaccgctccagggacacttggtgcaggccttggcacc
ggatttggacaaggtctgaacacgggccagacgtcgctgtttgggagcaatcagccaaaa
cttggtggcacgcttggcacaggcacctttggttctactgggtttaatgcagccaacgca
ggactggggttcgggggtcctcaagctcctgtggctttggctgatcccaacgcggcggcg
cagcagctggttcttcagcagcagctcactgctctggcctattctccatatggagactcg
cccctcttcagaaatcctatttcagacccaaagaagaaggaggagcgcctgaagcccact
aatccggcagcacagaaagcccttaccacccccacacactacaagctcacccctcgacca
gctaccaaagtgcgccccaaagcactgcagaccgcgggaaccgcaaagacgcaactgttc
gacgggttggacgatgatgagccgtccctgtccagcggagccttcatgcctaggaagagc
attaagaaattggtgctgaaaaacctgaacatcagcaatctggcctcgccgtcacgtagt
gagcaggacgaggcgtcctctccagccagatacccggagaacgatgacggagtccatgag
cataacggccctgaagtggacggacacgacgaagtgtccgaattctaccctcctcctcca
tctaagctgctccctcagagtctggagaagaagcgcatgaacagcggtatggatgacacc
attgtggcgctgaacatgcgcaacgctctcaggaacagcctggatggcagtgcagaggag
agttccctcacagaggaggacatcctccatgatgtgccccctcaccctgccggcattgtg
ctaacaagagaaggttactacacaatcccctccatggaggaactggccaagatgattgat
gaggacggaaagtgctttgtggaaggcttcactgttggccgtcgaggttatggatcgatc
tattttgaaggactggtcgacctgaccaacctgaacctggatgaaatagtccatgttcga
aataaggaggtgattgtgtatacagacgacgggaataagccgcctgtgggtgaagggctg
aacagggctgcggaggtgaccctgaacgaggtgtggccaatcgacaagaccacccgctcc
ctgataaagagccctgagcggctggaggagatgaattataagagcaagctggaagccgcc
tcccgaaaacaaggggcccaatttaaggagtaccgtccagagacgggctcctgggtgttc
aaggtgaagcatttctccaagtacgggctgcaagactcggatgaggaagaggaagatgcc
acatccaccgctgaaaccaagaagatgaaggcggctgccctcccccctcctggacagcag
ccgccccaacagcaggctgtacttactgggagacctacccctccaccgcagagcctggcg
gaggaggagctggggcgggtgttggagttggacagtgacatggcggacatcacccaggag
ccgctcctggattcagctgctgacgatcaggacaccacggaggagcaggagccggtgtct
gcatcatcccacatcgcatcgtccctgggggtcaaccctcacgccttacaggtgatgaag
gcttctctgctgttggaggatgagggtggggatctcgtctccccctttagctgcttccgg
ccggacactcctcaggagatgcggtcaccgctgaggtttgtccctgcagcgcagtctccc
cgggcgtccagcggtcgtctgcagtccaggttctccggaccctcaggtctgaaacagaag
gactctccacttctatctcagagccccaaacccccctcctccgctccgtggccggccctg
ggacctctctcttcagccttcatgatgccgtctcctgttccggagacgcagctgaggact
gtggggacccgtcgtcagcagggcctggtgccgctggagaagtccgtgtctgatggaaag
ggcaagctgctgatcgacatgtctctgttcatgggacgctccttctctgtgggctggggc
cagaactggacgctggcccatagtggggacgtgctgagcggggagagggaggaggccgcc
ggcgacaccgagaccatggactacggatttcttcccaaacccgtctctgctaaatctctt
acagaaaccccctttaaggttcacctggagaagctgagtctggaggagaagactacagat
ctccagtcctacctgattcctctagaaatcgccttgaaaaacagtacggtgcagagcgag
cgctgtccgcggcttgtgcccaaccctgggaactctgccatccacgactacgccggatgg
gtcggcgagttctgtgcggagcctgcacacgtggagcccgtggtgaagcagtggtgttta
acgtggacgctctgtaaggccctgtggggtcggctccgggagctggagaccgggctggat
gacctgaatgagtatgtggagaggctgcaccgcaggaaggccttctcccattggctggcc
gagacggcggcggagcgcatcgaagaggaggcggctctccacctccatgagcggccagtc
caggccgtgttcagcttcctgaccggctgccggattagcgaggcgtgtcggctcgctcag
aaatctggtgatcaccggctcgccatgttgctctctcagctggttggcagtcagcaggtg
gtggagctcaatgtcatgcagctggtggactggaggaatctgcaggtggacgctttcatc
caggaggagcggctgaagatctatgccttgttgtcggccaccccggtgtggcagtcatct
gataagaggagcattaatgtctgctcggagctcgactggaagcgggcattggccgttcac
ctctggtacatgctgccacccacggcctccatctcccaggctttgcagcagtacgagacc
gcctttcaggagtcaggggaaggcacacgatatgctgcgtacccgctccccgactacctc
gaaggacacggcctccgtctagaagccatcgatgcagatacttccgccatcaagagagac
gtctgcttccacctcctgaagctctacagcgacaggtgttatgatcttcggcagctcttg
gaccccaggagcgtgaccccggaccccctggactatcgtctgagctggcatctgtggatg
gtcctgcaggcgctgaactacacgcacctctccgagcagagccaggggctgctccacgcc
agttacaccgagcagctggagaacgtgggcctctgggagtgggccatatttgtgctgctt
cacgtgcccaatgccgtcatccgagagacctcggtccgggagctgctgaacagacactgt
gccctgagggagactctcgagacgctgaccaaggagaagttcctgatcgagaagctctgc
atccctgccgaatggatctacgaagccaaagctatccgtgccaggagagaaggagaccac
cacagggaggcgctctacctattacgggccggacactggaaccagtgccacaggctggtg
tgccggcacctggcgtcagacgccatcatcaatgagaactactcgtacctgcgcagcttc
ctggacgagctctcccggccggagaactgtgcgcacatccagggctgggacacggccggc
caggtctacatggactacatcggcgtcgtcgagatgctgaaccacatccgacagaacgaa
tcttccggctgtgaacttgaacgactgcacacgaaagtgacgtccgtctgtaaccgggtc
gatcagatccaatgctgcaactccaaagatcggctagcgcagtccgaaatggcaaaacgc
gtggcgaacatcctgcgtgtcgtcctgcgtttacagcactcccctgactctgacgactct
gagctcccgcgcgtccccctcagactgctcgccccccacattgggcgattaccgatgccg
gaggactacgccctggaggagctgcacagcctcacccaatcctatctacgagaactcacc
gtgggcggccagtag
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integrated database retrieval system
