Bufo bufo (common toad): 120997200
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Entry
120997200 CDS
T07950
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf00100
Steroid biosynthesis
bbuf01100
Metabolic pathways
Module
bbuf_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120997200
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bbuf01006
]
120997200
Enzymes [BR:
bbuf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120997200
Prenyltransferases [BR:
bbuf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120997200
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2480
Motif
Other DBs
NCBI-GeneID:
120997200
NCBI-ProteinID:
XP_040283129
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Position
4:47039847..47068294
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AA seq
408 aa
AA seq
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MDFLRSLGHPEEIYNLLRFRLGGCRLVLSKEDRESMSDSLQTCYKYLDQTGRSFATVIHT
LDIELRNAVCIFYLVLRALDTVEDDMTLSLETKIPMLHNFHTYLYQAEWRFPESKYKDHV
VLRDFPTISQEFRNLPVGYQKVIVDICREMGMGMAEFLEMKVESLLDFDKYGQLASGLMV
IGLSRLFSASGLEDACIGEDIRLSNSVGLFYQKANIIRDYLEDQLDGREFWPREVWSKYG
KNLSDFAKPENIVPAVQCLNELVTNALQHVPDVLLYLSRLRNQSVFNFNAILQVMTMATL
AAFYNNPQVFKGVVKIRKGQTATLMMDTTNMQVVRAVMYQYANKIDQKIPLTDPSAGLTK
NMASTIQKLSLFGGPLVSRYSFFPTYLSHAVLFAALSWLYLSTIKAQS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctgaggtctctaggacacccggaggagatctacaacctgctcaggttccgg
ctgggcggctgtcggctcgtgctgtctaaggaggaccgggagtccatgagcgacagcctg
cagacctgctacaagtacctggaccagaccggcaggagcttcgcgactgtcatccatacc
ctggacatagagctgagaaatgccgtgtgtatcttctatctggtgcttcgagctctggac
accgtggaggacgacatgaccctcagtctggagaccaaaatccccatgttacataacttc
cacacgtacctgtaccaggcggagtggaggtttccagagagcaagtataaggatcacgta
gttctgcgggacttccccacgatttcccaggagttcagaaacctgccggtgggttaccag
aaggtgattgtagacatctgccgcgagatggggatgggcatggcggagttcttggagatg
aaggtggaatctctcctggatttcgataagtacggtcaacttgcgtctggattaatggtg
atcggtctgtcccggctgttttctgcctcaggactggaagacgcctgcattggcgaggat
ataagactctcaaactctgtggggctcttctatcagaaagcaaacatcatccgagattac
ctggaagaccagctggacggaagagagttctggcccagagaggtgtggagcaaatacggc
aaaaatctgtccgactttgccaaaccggagaacatagtgccggctgtgcagtgcttgaat
gaactggtgaccaatgctctgcagcacgtgcccgatgtcctgctctacctgtcccggctg
aggaaccagagcgtgtttaactttaatgccatcctacaggtcatgactatggccacactg
gccgccttttataacaacccgcaggtgtttaagggagtggtgaagatccgtaaaggacaa
actgcgacgctgatgatggacaccaccaacatgcaggtggtcagagccgtcatgtaccag
tatgcgaataagatcgatcagaagatccccctaacagacccctccgctggactcacaaag
aacatggcctccacaattcagaagctgagcttgttcggtggccccctggtgtcccgctac
agcttcttccccacttacctgtcacatgcagtccttttcgccgccctcagctggctgtac
ctgagcacaatcaaagcacaaagttag
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