Bufo bufo (common toad): 120997677
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Entry
120997677 CDS
T07950
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04136
Autophagy - other
bbuf04140
Autophagy - animal
bbuf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120997677 (ATG16L1)
04136 Autophagy - other
120997677 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120997677 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
120997677 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
bbuf03029
]
120997677 (ATG16L1)
Membrane trafficking [BR:
bbuf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120997677 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
120997677 (ATG16L1)
Mitochondrial biogenesis [BR:
bbuf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120997677 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
CCDC93_CC
DUF6468
WD40_like
Lipoprotein_6
AP5B1_middle
V_ATPase_I
HEF_HK
DUF1664
WH_CYT4
DUF7310
Motif
Other DBs
NCBI-GeneID:
120997677
NCBI-ProteinID:
XP_040283823
LinkDB
All DBs
Position
4:complement(130674766..130741981)
Genome browser
AA seq
621 aa
AA seq
DB search
MAAGCRAGAYPGWKVHISRELRRRDREQRQAFEELILQYNKLLEKSDFQSVLADKLQTEK
YDQSRHDISPGPDGMRHEALLQDMAQMRIKHQEELTDLHKKRGELAQTVIELNNQMQQKD
KEIQANKETIEEYQRTISELQTECQDLRNKLQELERINQTLKDEYDALQITFNALEEKLR
KTTEDNQELVTRWMAEKALEANRLNAENEKDTKRRQAKLQKELAEAAKEPVSVEQDDDIE
VLNDNADPSGDAMAPPVSGRMSGKRLSQPAVGGLLDSITNMFGLSESPLLGHHSDTSRRR
SISSFPASQDSTDAQAGGNREVRVPVAALHSFDAHDGEVNAVRFSPGSRLLATGGMDRRV
KLWEVIAERCEAKGSLTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDLRLRHTLTG
HSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRNKVCIKTVFAGSSCNDIVCTEQCVMSGH
FDKKIRFWDIRTECIVRELELQGRITALDLNHERTELLSCSRDDLIKIIDLRASAVRQTF
SAQGFKCGSDWTRVIFSPDGRYVSAGSADGALYFWNVMTGKVEKILGKQHCSSINAVAWS
PSGAYVVSVDKGSKGVLWSDF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggctgcagggcaggggcttaccctggatggaaggttcacatctcccgggag
ctgaggaggagagaccgggagcagagacaggccttcgaggagctcatcctacagtataac
aagttgcttgaaaagtctgactttcaatctgtgttggctgacaagctgcaaacggagaag
tacgatcagagccgccatgacatcagcccaggaccagatgggatgcgacatgaggctcta
ctacaggacatggctcagatgaggataaagcaccaagaggagttgactgatcttcataaa
aagcgtggcgagctagctcagacagtgatagaactgaacaaccagatgcagcagaaggac
aaagagatccaagccaacaaggaaacgatagaggaatatcagcgcacaatcagtgaactc
cagacagagtgtcaggatttacggaataaactgcaggaacttgagcgcatcaaccaaacc
ctgaaggacgaatacgacgctctgcagatcacttttaacgcactagaagagaagctgcgg
aaaactacagaggataaccaggagctggtcactcgctggatggcagagaaagctctggaa
gccaaccggctcaatgctgaaaatgagaaggacacaaagaggaggcaggccaaactacag
aaagagctggctgaagcagccaaggaaccggtgtctgtagagcaggatgatgatattgaa
gtattgaatgataatgcagatccctccggggatgccatggcccctccagtttctggacga
atgtctggtaagagactctctcagcctgccgtaggaggccttctggactctatcactaat
atgttcggcttgtctgagtctcccctcttgggccatcattctgacacctccaggaggcgc
tctatatcttctttcccagcctcacaggacagcacagatgctcaggcgggaggtaaccgg
gaggttcgcgttccagtggcggctcttcactcatttgatgctcatgatggcgaggtcaat
gcagtgcggttcagcccaggctcacgactgttggctacaggagggatggaccgccgggta
aagctgtgggaggtgattgcagagaggtgtgaggcaaagggatcattgacgggaagcaat
gcgggcattacaagcatagagtttgacagtgcaggttcctaccttttggctgcgtctaat
gattttgccagcaggatctggacagttgatgaccttcgccttcggcatacactgacgggg
cacagtggaaaggtgttgtcagctaaattcctactggacaacgctcgcatcgtgtcagga
agtcatgaccgtactttgaaactctgggatctgcgtaacaaagtgtgtatcaagactgta
tttgctggctccagctgcaatgacattgtctgcactgagcagtgtgtgatgagcgggcac
tttgacaaaaagattcgtttttgggatataagaacggagtgtatagtacgggagctggag
ctacaaggtagaatcacggctctagatctgaaccacgagaggacagagttgctcagttgc
tcccgggacgacctgatcaagatcatagatttgcgtgccagtgcagtacgacagaccttt
agtgcgcaaggtttcaagtgtggatctgattggactagagtcatatttagccctgatggt
agatatgtgtcagccgggtcagcagacggggctctatatttctggaatgtgatgaccggg
aaagtggaaaagattcttggcaagcagcattgttccagtattaatgccgttgcctggtct
ccctctggtgcctacgtagtgagtgtggacaaaggaagcaaaggcgtattatggtcagac
ttttga
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integrated database retrieval system
