Bufo bufo (common toad): 120997704
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Entry
120997704 CDS
T07950
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04136
Autophagy - other
bbuf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120997704 (ATG4B)
04136 Autophagy - other
120997704 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbuf01002
]
120997704 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
120997704 (ATG4B)
03029 Mitochondrial biogenesis [BR:
bbuf03029
]
120997704 (ATG4B)
Peptidases and inhibitors [BR:
bbuf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
120997704 (ATG4B)
Membrane trafficking [BR:
bbuf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120997704 (ATG4B)
Mitochondrial biogenesis [BR:
bbuf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120997704 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
120997704
NCBI-ProteinID:
XP_040283873
LinkDB
All DBs
Position
4:133822265..133850281
Genome browser
AA seq
381 aa
AA seq
DB search
MMDAATLTYDTLRFADTPDFPETSEPVWILGKKYSALTEKEDLLNDVTSRLWFTYRRNFP
AIGGTGPTSDTGWGCMLRCGQMIFSQALICRHIGREWRWDKKTPTGEYLSILTAFLDKKD
SYYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLADFDQWSSMAVHIAMDNTVVTDEIE
RLCRLGSCDSGPLCNGHTGASDSHRQWKPLVLLIPLRLGLSEINEAYIETLKHCFMLPQS
LGVIGGRPNSAHYFIGYVGDELIYLDPHTTQPTVEPSDGGYIVDDSFHCQHPPCRMHVTE
IDPSIAVGFFCSSEEDFDDWCKRIRKISLTAGSLPMFEVVDQLPPHLSNPDVLNLTPDSS
DADRLDRFFDSEDEEFEILTF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcagcaacacttacatatgacactctgcggttcgctgataccccggacttt
cctgaaacttcagagcctgtctggatattggggaaaaaatacagtgcgttaacagaaaag
gaggatcttctgaacgatgtcacatccagactgtggtttacttaccgacggaactttcca
gcaataggtggaactggtccaacctctgacactggctggggctgcatgctgcgatgtggg
cagatgatcttttctcaggctttgatctgtaggcatataggacgagaatggaggtgggat
aaaaaaacaccaactggagagtacctcagcatcctgactgcttttctagacaagaaagat
agttattactccatacatcagattgcccagatgggagtcggtgaagggaaatacattggc
cagtggtacggtccaaacactgtagcacaagtgctgaggaagctagctgattttgatcag
tggagctcgatggcggttcacatagcgatggataatactgttgtgacagatgagatagag
agattgtgtagattgggaagctgtgactctgggccgctgtgtaatggtcacactggagcc
tctgattcacaccgccagtggaagcctctagtattactcataccccttcggctgggccta
agtgagatcaatgaagcatacatcgaaaccctgaagcactgcttcatgctgccacagtct
ttaggagttattggtggtcggccaaacagtgctcattacttcataggctatgtcggagat
gaactcatttatctagatccccacactacacagccaactgtggagcccagtgatggaggg
tatatagtagatgacagcttccactgccagcatcctccatgccggatgcacgtaacagag
attgacccctctattgctgtgggattcttctgcagttctgaagaagattttgatgactgg
tgtaagcgcattagaaagatatcacttactgcgggatctttgcctatgtttgaggtggtt
gatcagctaccgccccatctgtccaatcctgatgtactaaaccttactccagattcctca
gatgcagaccgccttgacagattctttgattcagaagatgaagaatttgaaattttaact
ttttga
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