Bufo bufo (common toad): 120997824
Help
Entry
120997824 CDS
T07950
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120997824 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120997824 (DHX36)
03012 Translation factors [BR:
bbuf03012
]
120997824 (DHX36)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120997824 (DHX36)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120997824 (DHX36)
Translation factors [BR:
bbuf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120997824 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
120997824
NCBI-ProteinID:
XP_040284062
LinkDB
All DBs
Position
4:complement(175493938..175587387)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSYEHRKGWGRGRGGRGRGSSSSYHDGGSSSEAGEGVRERPPPHLRGREIGMWYARRQGP
KRKERERLERAVVRMDESREQHITHLLNCVQAQSRDVKQEPSSEESWWATENERSSKKKE
KPGSANKWVRNSAAPEIALAEDDVKDAWDDDEEEAEQEKFAASCYGENRVNAALDRRLKE
ELQDKRTDSRYREMQVFRQKLPSYNMKEEIIKIVHANRVTVISGETGCGKTTQVTQFILD
DFINRGKGSACHIVCTQPRRISAISVAERVAAERAEPCGRGCSTGYQIRLECQLPRKQGS
ILYCTTGVVLQWLQSDQRLISVSHVVIDEVHERNLQSDMLMAIVKDLLKIRPDLKVILMS
ATLNAAKFSQYFDNCPMLHIPGLTFPVKEYLLEDVYEMIKFRPKESDCRPRTNRRFMQGL
NTRPEKSEKEEIYRERFPKYLQQLRGTYSESTIHAIEYTDDEKINLDLIVELIRHICVTG
EDGAILVFLPGWANISTLNDLLMSQVMFKTAWFLIIPLHSLMPTVNQTQVFKTPPPGVRK
IIIATNIAETSITIDDVVHVIDGGKLKETNYDTQNNIRTMTAEWVSHANAKQRKGRAGRV
KPGNCYHLYNRLRESLLDDYQLPEIVRTPLEELCLQVKILKLGGIDSFLQKVMDPPSREA
ILLAITHLIELNALDRREELTPLGFHLARMPVEPHIGKMILFGALFCCLDPVLTIAASLS
FKDPFVIPLGKDKLADAKRREMSQNTKSDHLTILNAFRGWESAKQWGPRAEREYCWDFFL
STNTLKMLGDMKGQFAEHLLGAGFVSSRSPKDPKSNINSDNEKLIKAVICAGLYPKVAKI
RIGRKMKRSSVNVYTKADGKVCIHPKSVNVEETEFNHKWLVYHLKMKTSSIYLYDCTEVS
PYSLLFFGGDISIQKDQDQDTIAVDEWIVFQSPARIAHLVKDLKTELNSLLKEKIESPQP
VDWDDTRSRDCAVLLAIIDLITTQESGQAKNFDFDPSIPGHLY
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgagcatcggaaaggatggggccggggtcgtgggggtagagggcgaggatcc
tcctcatcctaccacgatgggggctcttccagtgaggcaggcgaaggtgtgagggaaaga
ccaccgccgcacctgagaggccgggagataggaatgtggtatgcacgaaggcagggcccg
aagagaaaagaaagggagaggttggagagagcggtggtacggatggatgaatccagagaa
cagcacatcacgcatcttctgaactgtgtgcaagcacaaagcagagatgtcaagcaggag
ccgtcttcggaggagtcgtggtgggcaaccgaaaatgaaaggtcctcgaagaagaaagag
aagccgggcagcgcgaacaagtgggtgagaaatagtgccgcccctgaaatcgcattggca
gaagatgacgtgaaagatgcctgggatgatgatgaggaggaggcggagcaggagaaattt
gctgcgtcctgttatggagagaacagagttaatgcagccttggatcgacgccttaaagaa
gaactgcaggataaaaggaccgatagtagataccgtgaaatgcaggtatttcgtcaaaag
ttaccttcatacaatatgaaagaggagatcattaaaatagtacatgccaatcgagtgaca
gtcattagcggagagaccggatgtgggaagaccacgcaagtaactcagtttattctggac
gattttattaacagaggaaaaggctctgcttgtcacattgtgtgtacacagccccgaaga
atcagcgcaatttcggtagcagaacgtgtggctgcagagcgagctgagccctgtggcagg
ggatgcagcactggctaccaaatacgtcttgaatgtcagttgccacggaaacaagggtct
attttgtactgtacaaccggcgtagtcctgcagtggcttcagtccgatcagcggttgatc
agcgtcagccatgtcgtgatagatgaagtccacgagaggaatttgcaatctgacatgctc
atggccatagtaaaagatcttttgaagatacgtccggatctgaaggtcatattaatgagc
gccacactgaatgctgcaaagttttctcagtattttgacaactgtcccatgttgcatatc
ccaggattaacattccctgtgaaggagtatctcttggaggatgtatatgaaatgataaaa
ttccgtccaaaggaaagtgattgccgaccacgcacaaatagacgttttatgcagggactt
aacactcgtccggagaaatctgaaaaggaagaaatctacagggagcgcttcccaaaatat
ttacagcaacttcgaggaacatattctgaaagtaccatacatgctatagaatatacagat
gatgagaaaattaaccttgacctgattgtagagctcatcaggcatatttgtgtgacggga
gaggatggagcaatcttagttttccttccaggctgggctaatattagcacactgaatgac
ttactgatgtcacaggtcatgtttaagacagcctggtttcttattatccctttgcattca
ttgatgccaactgtaaatcaaacacaggttttcaagactccccctcctggagttcgtaaa
attatcatcgcgaccaacattgcagagacaagtattaccatagatgatgtggtacatgtc
atagatggaggcaaattaaaggagacaaactatgacacgcaaaataatatccgcaccatg
accgcagagtgggttagtcatgccaatgccaagcagaggaaaggacgtgctggcagagta
aaaccaggaaactgctatcatctatataacaggctgagggaaagtctgctggacgattac
cagctgccagaaattgtaaggacaccgctggaagaactctgccttcaagtcaagatcctg
aaactaggaggtattgactctttccttcaaaaagtaatggatccaccatcaagggaagca
atactactagcaataacgcatcttatcgagctgaatgccctagataggcgtgaggaactt
acaccacttggcttccatttggcacgcatgcctgttgagccacatattggcaagatgatt
ctctttggtgctttgttctgctgtttggatccagtcttaacaattgcagcaagtctcagc
tttaaagacccatttgttattcctctgggaaaagataaattggcagatgcgaaaagaagg
gagatgtcacagaatactaaaagtgaccatttgactatcctgaatgcattccggggctgg
gaaagtgcaaaacagtggggtccgagagcagaaagggagtactgctgggatttcttcttg
tctaccaataccctcaagatgttgggagacatgaaaggacagtttgctgaacatctgctc
ggagctggctttgtgagcagcaggagcccaaaagatcctaaatctaacatcaattcagat
aatgagaagctcattaaggctgtgatatgtgctgggttgtacccaaaagtggctaagatt
cgtatcggccgcaagatgaaaagatcatcggtaaatgtctatacaaaagcagatggcaag
gtctgcattcaccccaaatctgtgaacgtagaggagacagaatttaaccataaatggctg
gtttatcacctgaaaatgaaaactagcagtatttacctgtatgactgcaccgaggtctct
ccgtactcgctgcttttctttggaggagatatttccattcagaaggaccaggatcaggac
acaattgcagtagatgagtggattgtcttccagtctcctgctcgcattgctcatttagtt
aaggatttaaagaccgagttaaattcacttttgaaagagaagattgaaagtcctcagcct
gtggattgggatgataccagatctagagactgtgccgttcttttagctatcattgatctg
ataaccacacaggagagtggacaagccaagaactttgactttgatccttcaattccaggg
cacctatactag
DBGET
integrated database retrieval system
