Bufo bufo (common toad): 120998258
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Entry
120998258 CDS
T07950
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120998258 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120998258 (CDC40)
Spliceosome [BR:
bbuf03041
]
Complex C
Other components
Step II factors
120998258 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
120998258
NCBI-ProteinID:
XP_040284803
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Position
4:337985253..338050469
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AA seq
566 aa
AA seq
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MAAGASLVSYSSGSEGESEEAEQATTHLQPLPPSSGSICAVNSAPEVAVKENVDVGIHLD
PSVKEVQFNPTYETLFAPELGPNNPFKSQQMAAPRNMLSGFAEPTHINDFMFEQQRRTFA
TYGYALDPSVDVQQTSTKYIGSVDDAEKNQGLTVFETGQKKSEKRRKVKGNDASDIDGFL
GPWAKYIDEKDVAKPSEEQQKELDEITAKRQKRGKQEDDKPADEKTILHVKEMYDYQGRS
YLHIPQDVDVNLRSTELPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSSSMDCKI
KIWEVYNERRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKLWDSETGQCISRFTNR
KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGDIVQEYDRHLGAVNTITFVDENRRF
VSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNR
FRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYSRLKAHDKVC
IGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggagcatccctggtgtcttatagcagtgggtctgagggtgaaagtgaagag
gccgagcaagcgaccacccatttacagcctttaccccccagttctggaagcatctgtgcg
gtgaactcggcgcctgaggtggcagtgaaggaaaatgttgatgttggcattcatctcgac
ccctctgttaaagaagtgcagttcaaccctacttatgaaacgttgttcgcacctgagctt
ggacccaacaatccatttaaaagccagcagatggctgctccaaggaacatgctttcagga
tttgcagaaccgacgcacataaatgacttcatgtttgaacagcagagaagaacatttgca
acatatggctatgccctagatccttcagtagatgttcagcaaacatccactaaatatatt
ggctcagttgatgatgctgaaaagaatcaaggtttaacggtgtttgaaactggtcagaaa
aaaagtgaaaagcggagaaaagtgaaaggaaatgatgcatctgatatagatggtttcctg
ggtccatgggcaaaatatattgatgagaaagatgtcgccaaaccgtctgaggaacagcag
aaggagcttgatgaaataaccgcaaagaggcagaagagaggcaagcaggaggatgataag
cctgcagacgagaagaccattttgcacgttaaggagatgtatgactaccaaggcagatcg
tatttgcacattcctcaagatgttgatgttaacctgcggtctactgaactgcctgagaaa
tgttatcttcccaagaaacaaattcatgtttggtccggacatacaaagggtgtcagtgct
gtacgattattccctctctctggccatttgctattgtcttcttccatggattgcaagatt
aagatttgggaagtgtacaatgaacgaagatgtttacggacatttataggtcacagtaaa
gctgttcgtgacatttgtttcaacaatgctggaacccagttcctaagtgcagcatatgac
cgctatctcaagctgtgggactctgaaacaggtcagtgcatatccaggttcacaaataga
aaggtgccgtattgtgttaagttcaatcctgatgaagataaacagaatctgtttgtggca
gggatgtctgataaaaagattgtacagtgggatattcgaagtggggatattgtccaggag
tatgacaggcatctgggagctgtcaacacaattacttttgtcgatgagaacaggcgtttt
gtaagcacctcagatgataagagcttgagagtctgggagtgggacattcctgtagatttt
aagtacatagcagaaccaagtatgcactctatgcctgctgttaccttgtcacctaatggt
aaatggttggcttgtcagtctatggataaccagatccttattttcggagcacaaaacagg
ttccgcttaaataaaaagaaaattttcaaaggtcatatggtggcaggttatgcttgtcaa
gttgacttttcaccagatatgagctatgtggtgtctggcgatgctgatggaaagctaaac
atctgggactggaagactaccaaactatacagcagattaaaggcccacgataaagtatgt
ataggtgcagtatggcatccgcatgaaacctctaaagttatcacctgtggatgggacggc
ctcatcaaactatgggactga
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