Bufo bufo (common toad): 120998514
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Entry
120998514 CDS
T07950
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120998514 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120998514 (HBS1L)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120998514 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-GeneID:
120998514
NCBI-ProteinID:
XP_040285111
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All DBs
Position
4:complement(378746384..378882252)
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AA seq
681 aa
AA seq
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MARHRNVRGYNYDDDFCDDDMYGQSVEDDYCISPATAAQFIYSKRDRLSSCTEPLEEEED
GCEDDDKSKVSCTTLSPFDQARLYSCLDHMREVLGESVSEKIMIDAVLQSGFDVAKALDR
IFKQDSNSSKKPVTQDVSSAERPGKGKAREMPTPDAQIVPKIAKLTVSGNKQTMGFSVPS
SAPSETNGQSVTACTRSQAMDDPMEEADNSVLCPSSSNTPQISEDLNSTPSQGKSSGKSK
RKINVKEELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGHVNKRTMHKYEQESKKA
GKASFAYAWVLDETGEERQRGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQA
DVAILVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVVVNKMDQVNWQEERFREVT
SKLGHFLKQAGFKDSDVYYIPTSGLSGENLSKKSEISELTSWYKGPCLIDQIDSFKAPQR
SVEKPFRLCASDVFKDQGSGFCVTGKIEAGYIQTGDHLVVMPPNDRCTVKGITLHDEAVD
WAAAGDHVSLTLTGVDIIKINVGCVFCSPSEPIRACTRFRARVLIFNFDVPVTQGFPVII
HYQTVSEPATIRRLISVLHKSTGEVVKKKPKCLTKGMNAMIELQTQRPIALELYKDFKEL
GRFMLRYSGSSIAAGVVTEIK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcaccgcaatgtgcgcgggtacaactatgatgacgatttctgtgatgatgac
atgtatggacagtcagtagaggatgactactgtatctcaccagcaacagctgctcagttc
atatattctaaaagggacaggctttcaagctgtacagagcccttggaagaggaggaagat
gggtgtgaagacgatgacaaatccaaagtttcctgtactaccctaagtccttttgatcaa
gctcgattgtattcatgccttgatcacatgagagaagtcttaggagaatctgtatcagag
aagatcatgattgatgcagtattgcaaagtggctttgacgtggcaaaggccctggaccga
atctttaagcaggacagcaactccagcaagaagcccgttacccaagatgtctccagtgct
gaaagaccaggaaaaggaaaagcaagagaaatgccaactccagatgcacagattgttccc
aaaattgccaagttgactgtttctggaaataagcaaacaatgggattttctgtaccaagc
agtgcaccatctgaaacaaatggtcagagtgttactgcatgtacgagaagccaggctatg
gacgaccctatggaagaagctgacaacagcgtgctatgtcccagctcatctaacacacct
cagatctcagaagacctaaattctaccccatcccaagggaaaagttctggtaaatccaag
cgaaagataaatgttaaagaagagctggagaaaagacaaggaggaaaacagctactcaac
cttgttgttataggtcatgttgatgccgggaaaagcactcttatgggccatttattatat
ctcttggggcatgtgaacaaaagaactatgcacaaatatgagcaagagtccaagaaagca
ggaaaagcttcttttgcatatgcgtgggtgctagacgagacgggagaagaaaggcaaaga
ggagtaactatggatgtaggcatgaccaaatttgaaacgaagactaaagttattactctg
atggatgcaccggggcacaaagatttcatcccaaacatgataactggagctgcacaagct
gacgtggccattttggttgtagatgccagtcgtggggagttcgaagcaggctttgaagct
ggtggacagacacgtgaacatgcacttctggtccgatctcttggagtgactcagttagcc
gttgtagtcaataaaatggatcaggttaactggcaggaggaaaggtttcgggaagttact
agtaagcttggacacttcctaaagcaagctggtttcaaggacagtgacgtttattacatt
cctaccagtggtcttagtggggaaaatttgtcgaaaaagagtgaaataagtgaactgaca
agttggtacaaaggaccgtgccttatcgaccaaattgattcgtttaaagctccacaacgt
tcggttgagaaaccttttaggttgtgtgcatctgatgtttttaaagatcaaggttctgga
ttttgcgtgactggcaaaatagaagccgggtacatccagactggagaccacttagtagtt
atgccccctaatgatagatgcacagttaaaggaatcacattacatgatgaagcagttgat
tgggccgcggccggagatcacgttagtctcactttgaccggcgtggatatcatcaaaatc
aatgtgggctgtgtgttctgcagtcctagtgaacctatcagagcctgtacacgtttccga
gccagagttctcatctttaattttgatgttcctgtaacacaaggattcccagttattata
cactaccaaactgtgagtgagcccgccaccatcaggaggctgatcagtgtactacacaag
agcacaggagaagtggttaagaaaaagccaaaatgtctcacaaaaggaatgaatgccatg
atagagcttcagacacaaaggcctatcgctttagaattatacaaagactttaaagaactt
ggccggttcatgcttcgatacagtgggtcatctatagcagctggagttgtcacggagata
aaataa
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