KEGG   Bufo bufo (common toad): 120998655
Entry
120998655         CDS       T07950                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120998655 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbuf03021]
    120998655 (TAF5L)
   03036 Chromosome and associated proteins [BR:bbuf03036]
    120998655 (TAF5L)
Transcription machinery [BR:bbuf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     120998655 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     120998655 (TAF5L)
Chromosome and associated proteins [BR:bbuf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     120998655 (TAF5L)
    STAGA complex
     120998655 (TAF5L)
    TFTC complex
     120998655 (TAF5L)
    SAGA complex
     120998655 (TAF5L)
    SLIK complex
     120998655 (TAF5L)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 TFIID_NTD2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Vps41 Tricorn_2nd RMC1_N Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 eIF2A Beta-prop_HPS5 WD_LRWD1 PEP5_VPS11_N DUF7165 Ge1_WD40 Mala_s_1-like
Other DBs
NCBI-GeneID: 120998655
NCBI-ProteinID: XP_040285345
LinkDB
Position
4:451168333..451210808
AA seq 589 aa
MKRVRTEQIQLAVTCYLKRRHYIDVDGSLKQGLRLCQTAEEMATNLTVQAESSFSNIVSS
APCQVEPQQYELQFARLRKFLSDEDCPESQDVAAVLYPLFVYLHLDMVQNCLKSMVDSFY
SRFHGMFLQNPAQREIIQLLQTTMTMQDIHSNFKLQAFLDNKYVVRLQEDGYNYLLRYMQ
SDDNIALLKALTLHVHLDVQPKKRTEYQLYASNTFSTRGGNGTLEPQDVPAPILQNEAAL
EQLQDCIKRVKDGPPSCTTVCFYAFYNTDNLLNTAEISPNGKLLVAGFDNSSIKLWSLRT
KKLRAETNRVDVSRIQLASDILEEDEMDDQAGTEMKILRGHGGPVYSTRYLSNSAGLLSC
SEDASIRYWDLNSFTNTVLYEGHAYPIWDLDVSTCSLFFASGSHDCTARLWSFDRTFPLR
IYSGHLADVDCVKFHPNSNYIATGSMDKTVRLWSSQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDHRLKLWDLGSGTLFKELRGHTDNVNSLAFSPDSSLIASASMDNSVRLWDIR
NPYCSALSDGSSSELVGVYTGQTNNVLSVQFMACNLLMVIGTALGNQEY
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaagcgagtacgcacagaacaaattcagttggccgtgacctgctatctcaaacgccgt
cattacatagatgtagatggatctctaaagcaaggtcttcgactttgccagactgcagaa
gaaatggcaactaatctaactgtacaggccgagtctagcttttcaaatattgtatcttcc
gcaccgtgtcaagtagaaccacagcaatacgaactgcagtttgcacgtcttcggaagttt
ctttcagatgaggattgtcctgaaagccaggatgtggctgccgtactctaccctttattt
gtttacctccatcttgacatggttcaaaattgccttaaaagtatggtggatagcttctac
agtcgtttccatgggatgtttcttcagaatcccgcacagagagagataattcagctgctt
cagacaaccatgaccatgcaagacatacactcaaactttaagctgcaagcttttctcgat
aacaagtatgttgtccgcctgcaggaagacggctataattatctgctccgctacatgcaa
agtgacgacaacatcgccctgctcaaggctctgacattacatgtgcatttagatgttcag
ccaaagaagagaacagagtaccaactatatgcaagtaatactttttccaccagagggggg
aatggcactcttgagccacaggacgtaccagctcctattctccaaaatgaagcagcactt
gagcagctgcaggactgtataaaacgtgtaaaagatgggccaccttcatgtacgactgta
tgtttctatgcattttacaacactgacaatttgttgaacacggctgaaatttcccccaat
ggcaaactccttgttgctgggtttgataactcttctataaaattgtggagcctgaggacg
aaaaaacttagagcagaaacgaacagagtggatgtttcgcgcatacaactagccagtgat
atcctagaagaggacgaaatggatgaccaggcaggaactgaaatgaagatattaagaggc
catggtggaccagtttatagtacacgatacctgtccaacagtgcaggccttttgtcgtgc
tctgaagacgcttccattcgttactgggatttaaacagttttactaacacagtcctgtat
gagggtcatgcatacccaatatgggatctagatgtcagcacttgtagtttgtttttcgcc
agtggctcccatgattgcacagccagactctggtcatttgaccgaacatttcctctccgg
atatattctggacatttagcagatgtagactgtgtaaagttccatcccaattccaattac
attgccacaggatctatggataaaacagttcgtctgtggagcagtcagcaggggaactct
gtgaggctttttaccggtcaccgagggcctgtacttgctcttgctttttcacctaatgga
aagtacttggcctcagctggggaagaccatcgacttaaattatgggatctgggatcaggt
acactatttaaagaactaagagggcatacggacaatgtcaacagtcttgcgtttagccca
gatagtagtttgattgcctctgcatcaatggacaactctgttcgtttatgggatattaga
aatccatattgcagtgctctttctgatggctcctccagtgaattagttggagtgtacaca
gggcagacaaataatgttttgagtgtgcaatttatggcttgtaatctgttaatggtaatt
gggacggctttaggaaatcaggaatattag

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