Bufo bufo (common toad): 120998681
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Entry
120998681 CDS
T07950
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
120998681 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbuf04812
]
120998681 (SPAST)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
120998681 (SPAST)
Membrane trafficking [BR:
bbuf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120998681 (SPAST)
Cytoskeleton proteins [BR:
bbuf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120998681 (SPAST)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
AAA_14
MIT
Mg_chelatase
AAA_16
RNA_helicase
IstB_IS21
AAA_2
DUF815
NPHP3_N
AAA_24
nSTAND3
SP_0191-like
Motif
Other DBs
NCBI-GeneID:
120998681
NCBI-ProteinID:
XP_040285388
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Position
4:458579181..458685715
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AA seq
612 aa
AA seq
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MNSPGGRGHKKKPATPAANTGPGPPAPPSRSASPVPGAPPPSLHKRNLFVFSYPLLAAFS
LLRFIAFQLGLLFAWCCDRLSRRVMADKKLAASRTLSERSARAVTPDRPQEPEVVRGYHQ
QAFHYISMALRIDEQEKDQKEQAIECYKKGIEELEKGIAVQVSGQGDQFDRARRLQGKMT
TNLLMAKDRLQLLATLQADMQGQNKQMEMCSDSTNLPCRNGHLKPEKGAVPKKKDPTSLT
SNPIPRAKVTPKTMSPGISSAPRIPNCTTSSTSNRQTGSNPSAHRGAGAKHTRPNNKPAT
PTTGLRKKDMKNLKNVDSNLANLILNEVVDSGPSVKFADIAGQELAKQALQEIVILPSIR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFSVARELQPSIIFIDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMG
ATNRPQELDEAVLRRFAKRVYVSLPNEETRLTLLQNLLSKQGNPLTQKELAQLARLAEGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKFSDFQNSLKKIKCSVSSSTLESY
IRWNKEFGDTTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggaagaggacacaagaagaaaccggcgaccccagcggcaaacaca
ggtcccgggcctccagcaccgccctctcgttcggcgtctccggtaccgggcgctccacct
ccttctcttcataagcggaacctcttcgtgttctcctatcccctgctcgctgccttctcg
ctgctccggtttatcgccttccagctcggcctgctcttcgcctggtgctgtgaccgcctc
tcccgtagggtcatggcggacaaaaagctcgccgcttcccggacactcagcgagcgcagc
gcccgggctgttacgccggacaggccgcaggagccggaggtggtgcggggatatcaccag
caggccttccactacatctctatggccctccgtatagacgagcaggagaaagaccagaag
gagcaagctattgaatgttacaagaaaggtattgaggagctagagaaaggaatcgctgta
caagtcagtggacaaggggatcagtttgacagagcacgacgtctacagggcaaaatgacg
accaatttactaatggcaaaggatcgcttacagttattggcaacgctgcaagcagatatg
caaggtcagaacaagcaaatggagatgtgtagtgacagtactaacctaccttgccgcaat
ggacatctcaagccagaaaaaggtgcagttcctaaaaagaaagacccaacctctcttacc
agtaaccctatcccacgggcaaaggtcacaccaaaaactatgtcccctggtatttccagc
gctcctaggatacccaattgtaccacttcttccacttctaataggcaaaccggttcaaat
ccttcagctcataggggagctggagcaaaacacactagaccgaacaataagccagcaaca
ccgaccacaggtctcaggaaaaaagatatgaagaatttaaaaaatgtcgacagcaacctt
gcaaacctgattttgaatgaagtcgtagacagtgggccgtctgtgaagtttgctgacata
gcaggccaggaacttgctaaacaggccttacaggaaatcgttatacttccatctattcgt
ccagagttgttcactgggcttagggctcctgctcgcgggctgttactgtttggtcctcca
ggaaatggaaaaactatgttggcgaaggcagtggctgctgaatcaaatgcaacctttttt
aatataagtgcagctagtctcacctctaaatatgtaggagaaggtgaaaaattagtgcga
gcgctcttttctgtggctcgagaacttcagccatctattatttttatagatgagatagat
agccttttatgtgaaaggcgagaaggagaacatgatgctagcagacgattaaagactgaa
tttttaatagagtttgatggtgtacagtctggaggggacgacagagttcttgttatgggg
gcaactaacagaccacaggagctggatgaggcagttctcaggagatttgctaaaagggtt
tacgtctccttgccaaatgaagagacaaggctgacactcttgcaaaacctgttaagtaag
caagggaaccctcttacacagaaagaattggcacagttggcaaggctggctgaaggatac
tctgggagtgatctaactgcattggcgaaagacgccgctcttgggccaataagagagcta
aaacctgagcaggtgaaaaatatgtcagccagtgagatgcggaacatcaaattttctgac
tttcagaattccttgaagaagataaagtgcagtgtgagttcttctacactggagtcttac
atccgatggaataaagaatttggtgataccacagtatga
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