Bufo bufo (common toad): 120998719
Help
Entry
120998719 CDS
T07950
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120998719 (CHD5)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120998719 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
120998719
NCBI-ProteinID:
XP_040285445
LinkDB
All DBs
Position
1:complement(132849053..133084115)
Genome browser
AA seq
1959 aa
AA seq
DB search
MRGPLGNEEDPMEDMENEDMSEDEDLGMEAIDDFFPEEQVTIQKRKKSKKSKENKVTKTK
RRKKEGSDEDPSEIEDEIEMEKSESDGSDYSPNKKKKKKMKEKKEKKSKRKKKDGEDEEN
EEGCVKEPKTSAQLMEEWGLDNVDYAFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSK
MMTVLGAKWREFSANNPLKGSSAAAAAAAVAAAVETVAVATPLLVPPPPSAQPPPIRKAK
TKEGKGPGVRKKSKSKDSKKKGKGKKLANLKFKFGGMASKRRKGSSSEEDEREESDFDSS
SINSSSIRSDILAKKGKRGKKKSKRIEVGEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEDEEDAGEEEDEEDDHMEFCRVCK
DGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWREAPTC
ISGPPDEIDPLMPPPKPMEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMFRNYQRK
NDMDDPPPFDYGSGDEEGKSEKRKTKDPEYAKMEEKYYRYGIKPEWMMIHRIMNHSFDKK
GDVHYLIKWKDLPYDQCTWEIDDIDIPDYEALKQAYWDHRELMLGDDSRTPSQFKKNRKL
KEDLSQKPPLTPIVDPTVKFDKQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADE
MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFYVVTYTGDKDS
RAVIRENEFSFEDNAIKSGKKVFRMKKEAQIKFHVLLTSYELITIDHAILGSIEWACLVV
DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLDGFLE
EFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR
NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL
MLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF
NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIY
RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFKDDVE
DHHCGNLTICKKTGDNKDVEDSSVIHYDDGAISKLLDRNQDATEDTEIQNMNEYLSSFKV
AQYVVREDDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVN
YNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEEKPEGQSGRRQSRRQLKSDRDKPLPP
LLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSL
FMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFQQVNGKYSTPDMI
PEGAENKKCFEVVSSDPTTPVPASPAPLPPGTAPVPEKVETQSTLSEEMEAVEQKTTPLE
VQPSTKLEKEDVEEKSECQEFKEKQKKESAEEEEEKEIVNQSPKAEVPQEEKPSDKTGLS
NAPNKVEDNEPKSEEESKLDDKEEIVNRQNGDNCIKQEEEEGKQEDSGKFKFMFNIADGG
FTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYLILNEP
FKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAE
VECLAESHQHLSKESLSGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAAR
LQMSERSILSRLTNRGGDATVQGTFGSTQMYSNNFGPNFRGPGPGSIVNYNQMPLGPYVT
ASNGTHHPCYPDRKSIESLMDSASLERKGRPHDIIFIED
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgagagggccactggggaacgaagaggatccgatggaggacatggagaatgaagacatg
tcagaggatgaagatctgggtatggaggccatagatgacttctttcctgaagaacaggtc
accattcaaaaaagaaaaaagtccaaaaagtctaaggaaaataaagtgaccaagacaaaa
agaaggaaaaaagagggaagtgatgaggatccatcagaaattgaagatgagatcgagatg
gagaagtcagaaagtgacggcagtgactactcccccaataagaaaaagaagaaaaaaatg
aaggagaagaaagagaagaaatcaaaacgaaaaaagaaggatggagaagatgaagagaat
gaagaaggatgtgtaaaggagccaaagacctcagcacagctgatggaggaatggggactg
gacaacgtggactatgccttctccgaggaagactaccatacactgaccaattacaaggca
ttcagtcagtttctcagacctttaatagcaaagaaaaaccctaagattccaatgtccaag
atgatgactgtgctgggcgccaaatggcgggaattcagtgccaataacccgctaaagggc
agctcggcagctgcggctgctgctgctgtggctgcggctgttgagactgtggcagttgct
actccgctgttagttcctcctccaccatctgctcaaccgcctcctataagaaaggccaag
accaaggaagggaaagggcccggtgttaggaaaaaatctaaatccaaagactcaaagaag
aaaggaaaaggaaagaaacttgcaaatctgaagtttaaatttggaggcatggcaagcaaa
aggagaaaaggctcttcgagtgaagaggacgagagagaggagtcggactttgacagctcc
agtatcaacagctcctctatccggtcggatattctagcaaagaaagggaaacgagggaaa
aaaaaaagtaaaaggattgaagttggagaaggagatggatatgaaacagaccaccaggac
tactgtgaagtctgtcagcagggaggagagataatactttgtgacacgtgtcctcgtgcc
tatcaccttgtctgcctggatccagagctggagaaagcccctgagggcaagtggagctgt
cctcactgcgagaaagaaggcatccaatgggagccaaaggaagaagaggaggatgaagag
gatgctggagaggaagaggatgaagaagatgaccatatggagttttgtcgtgtctgtaaa
gatggaggggagctcctgtgttgtgacacttgcccctcctcctaccatttgcactgtctt
aacccacctttgcctgaaataccaaacggggaatggttatgccctcgctgcacttgtccg
cctttaaaaggcaaagttcaaaggattcttcattgggtatggagagaagcccctacatgc
atatcaggacctccagatgagatcgatccactgatgccacctcccaagcccatggaaggc
attccggaacgtgaatttttcgtcaagtgggcaggactctcctattggcactgctcatgg
gtgaaggagttacagctcgagctttaccacacagtgatgttccggaattaccaaagaaag
aacgacatggatgatccacctccgtttgattatggttcaggggatgaggaaggcaagagt
gagaaacggaaaacgaaagaccctgaatatgcaaaaatggaagagaagtattatcgatat
ggcataaagccggagtggatgatgatacaccggataatgaaccacagctttgataagaag
ggagatgtccattatctgattaagtggaaggacctgccctatgaccagtgcacttgggaa
attgacgacattgacattccagattatgaagctctaaaacaagcctattgggatcacaga
gagttgatgttgggagacgactccagaactcctagccaatttaagaaaaacaggaaatta
aaggaagacctttcacagaaacctcctttaacaccgatagttgatcctacagttaaattc
gataagcagccatggtacatcaatgccaccggtggtacgttacacccatatcaactggag
ggattgaactggcttaggttctcatgggcacagggcacagacaccatccttgcagacgag
atgggtcttgggaagactgtccaaactattgtgttcctctactccttgtataaagagggc
cattctaaaggtccttaccttgtcagtgctcccttgtccacaatcatcaactgggagcgg
gaatttgaaatgtgggcaccggagttctacgtggtcacttacaccggtgataaggacagc
cgcgccgtcatcagagagaatgaattctcctttgaggacaatgccatcaagagcgggaag
aaggtgtttcgaatgaaaaaagaagcgcaaataaaattccacgtgctcctcacatcttat
gagctcatcaccattgaccatgccattctgggctccattgaatgggcatgtcttgtggtg
gatgaagctcaccgactgaaaaacaaccagtccaaattctttagggtattaaatagctac
aagattgactacaaactgctgctaactggaaccccgctgcagaataacctggaggagctc
ttccaccttcttaacttcctcactcccgaaagattcaacaatctggatggcttcctggaa
gaatttgctgacatctctaaggaagaccaaattaaaaaacttcatgacttactagggcct
cacatgctgcggaggctgaaagcagatgtcttcaagaacatgccagccaaaacagaacta
atagtgcgagtggagcttagccaaatgcagaagaagtattataagttcattttaaccaga
aattttgaagccttgaattccaaaggaggtggaaaccaggtctccttgctgaatataatg
atggatttaaagaagtgctgcaaccacccgtacctctttcctgttgctgctgtggaggct
ccagtcttgccaaatggatcttatgatgggagttccttagtgaaatcgtctggaaaattg
atgctgctacagaagatgttgaaaaagttaaaggatgaaggacacagagtcctcattttt
tcacagatgactaaaatgctggatttacttgaagactttcttgagtatgaaggctataag
tacgagcgaatagatggaggaattacaggagggctgcgtcaggaggcaattgacaggttt
aatgctccaggtgctcagcagttttgttttttattgtctacccgagctggaggattagga
ataaatttagctactgcagatactgtcattatttatgactcagactggaacccgcacaac
gatatacaggctttcagccgtgctcacagaatcgggcagaatagaaaagtcatgatatat
cggtttgtcactagagcctccgtagaggaaaggattacccaggtggcaaagaggaaaatg
atgctgacccatctagtagtacggccaggtctggggtccaaatcgggctccatgtcaaag
caggaactggacgatatattgaaatttggaacagaagagcttttcaaggatgatgttgaa
gaccatcactgtggcaacttaaccatatgcaagaaaactggtgacaataaggacgttgaa
gacagcagtgtcatccattatgatgatggtgccatctcgaaacttctggatagaaaccag
gacgccaccgaggacacagaaatccagaacatgaatgaatatctgagttctttcaaagtg
gcgcagtatgtcgtgcgagaagatgacggagtggaggaggttgaacgggaaattattaaa
caagaagagaatgtcgatcctgattattgggagaagctccttcgtcatcattatgaacag
cagcaggaagatctggcaaggaatcttggaaaaggaaaaagaatccgcaagcaagtgaac
tacaacgatgcttcacaggaggaccaagaatggcaagatgaactttctgacaaccaatca
gaatattccattggttcagaggatgaagatgaagactttgaagagaagcctgaaggtcag
agtgggaggagacaatctcgtagacaactgaaaagtgacagagacaagcctcttcctccg
cttcttgctcgggttggaggaaacattgaggttcttgggtttaatgctcgacaacgcaag
gccttcttgaatgctataatgaggtgggggatgcccccacaggatgcctttaattcacac
tggcttgtccgggatctccgaggaaagagtgagaaagaatttagggcatacgtatcttta
tttatgagacacctctgtgagcctggagcggatggggcagaaacctttgccgatggtgtt
cctagagaaggactttctcgacaacatgtcctcaccagaattggagtcatgtcactagtt
cgaaagaaggttcaggaatttcaacaagtcaatggcaaatacagtacaccggatatgatt
cctgagggtgcagagaacaagaaatgctttgaagttgtttcatcagatccaaccacacca
gttccagcaagtcctgcgcccctaccaccaggaacagcccccgtgccagaaaaagtagaa
acacagagtacattgtccgaggagatggaagctgtggagcagaagaccacacctttggaa
gttcagccatcaaccaagttggagaaggaagatgttgaggaaaagtcagaatgtcaagaa
ttcaaagaaaagcaaaaaaaggaatctgcagaggaggaggaggagaaagagatagtgaac
cagagtcccaaagctgaagtccctcaagaagaaaagccctcagacaagacgggactaagt
aatgcaccaaataaagtggaagacaatgaaccaaaatcagaggaggagagtaaactagac
gacaaggaggaaattgtgaatcgacagaatggagacaactgtataaaacaagaagaagaa
gaaggaaaacaagaagatagtggaaaatttaaatttatgtttaatattgctgatggtggt
tttacagagcttcacacattatggcaaaatgaagaaagagctgccgtttcttcgggcaaa
atctatgacatatggcacaggcgacatgattactggttactagccggaattgtgacacac
ggctatgctcgctggcaggatatccaaaatgaccctcgctacttaattctaaatgagcct
tttaaatcagagatccacaagggaaactacctggaaatgaagaataaattcctcgctcgg
agatttaagttgctggaacaggcgttagtcattgaagagcagcttcgaagagctgcatat
ctcaatatgacccaggatccaaaccacccagccatggcactaaatgcccgactggccgaa
gtggagtgccttgctgagagccatcagcatctctccaaagagtccctatcggggaacaag
cctgctaatgctgtgctacacaaagttctgaaccaattagaggagttgttaagtgacatg
aaagctgatgtgacgcggttgccttccatgctgtctaggataccgcccgtggctgctcgc
ctacagatgtctgaacgcagtatacttagcaggttgaccaaccgcggaggtgatgccaca
gtccagggaacatttggatccacgcagatgtacagcaacaactttggcccaaatttccga
ggacctggtccgggcagtattgtgaactacaaccagatgcccctcgggccttacgtgacc
gcatcgaatggaacccaccacccatgctacccggacaggaaatccatagagtcgttgatg
gacagtgccagtttagagcggaaggggagaccacacgacatcatttttattgaagactaa
DBGET
integrated database retrieval system
