Bufo bufo (common toad): 120998952
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Entry
120998952 CDS
T07950
Name
(RefSeq) LOW QUALITY PROTEIN: squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf00100
Steroid biosynthesis
bbuf01100
Metabolic pathways
Module
bbuf_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120998952
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bbuf01006
]
120998952
Enzymes [BR:
bbuf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120998952
Prenyltransferases [BR:
bbuf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120998952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
GAS
DUF4046
Motif
Other DBs
NCBI-GeneID:
120998952
NCBI-ProteinID:
XP_040285761
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Position
4:complement(46467442..46538611)
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AA seq
434 aa
AA seq
DB search
MVLGPVQNPGGQQSLLXSRLQEWGLKXGRTMQKCFTPQNLAVCKLHSVTLPRQESMSDSL
QTCYKYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTMEDDMTISLETKIPILHKL
HTYLYQADWRFTESKDKHRVVLEDFPTISLEFRNLAAVYQKVIVDICQKMGVVAAEFLEK
QVESLLDWDKYCLCASGLPVIGVSRLFSASGLEDAIIGENTRLSGSVGLFLQKTNIIRDY
LEDQLEGREFWPREVWSKYSKKLSDFAKPENIVPAVQCLNELVTNALQHVPDVLLYLSRL
RNQSVFHFSAIPQVMSLATLASFYNNPQVFKGVVKIRKGQTVTLMMNATNMQAVRFFMYQ
YTNEIYQKIPLTDPSNECTQNIVSTIKKLSLCNGPLASHHNFSPIYLSCVILLAILSWQY
LRTVQASEEVHTGQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggttcttggccctgtgcagaatcctggcggtcagcagtcacttctantcagcaggctg
caggagtgggggctgaagngaggccgcaccatgcagaagtgcttcacaccccaaaacctg
gccgtgtgcaaacttcactctgttactctgccccgacaggagtccatgagcgacagcctg
cagacctgctacaaatacctgaaccagaccagcaggagcttcgccgccgtcatccaagcc
ctggacggagagctgcgacatgccgtgtgtatcttctatctggtgcttcgagctctggac
accatggaggacgacatgaccatcagtctggagaccaaaatccccattttgcataagctc
cacacgtacctgtaccaggcggactggaggtttacagaaagcaaggataagcatcgtgta
gttctggaggacttccccacgatttccctagagttcagaaacctagcggcagtttaccag
aaggtgattgtagacatctgtcaaaagatgggagtggtcgcggcggagttcttggagaag
caggtggaatctctcctggattgggataagtactgtctctgtgcgtccggattaccggtg
atcggtgtgtcccgtctgttttctgcctcaggactagaagacgccatcatcggcgagaat
acaagactctctggctctgtggggctcttcctgcagaaaacaaacatcatccgagattat
ctggaggaccagctggaaggaagagagttctggcccagagaggtgtggagcaaatacagc
aaaaaactgtcggactttgccaagccggagaacatagtgccggctgtgcagtgcttgaat
gaactggtgaccaatgctctgcagcacgtgcccgatgtccttctctacctgtcccggctg
aggaaccagagcgtgtttcactttagtgccatcccacaggtcatgtctttggccaccctg
gcctccttttataacaacccgcaggtgtttaagggagtggtgaagatccgcaaggggcag
acggtgacgttaatgatgaatgccaccaatatgcaggcggtcagattcttcatgtaccag
tatactaatgagatctaccagaagatccccctgacagacccctctaacgaatgcacacag
aacattgtctccaccatcaagaaattgagtctatgcaatggccctctggcatcccaccac
aacttctctcccatttacctgtcatgtgtgatacttttagccatcctcagctggcagtac
ctgaggacggtccaggcctcggaggaggtgcacacaggccagtga
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