Bufo bufo (common toad): 120999162
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Entry
120999162 CDS
T07950
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04510
Focal adhesion
bbuf04512
ECM-receptor interaction
bbuf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120999162
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120999162
09142 Cell motility
04820 Cytoskeleton in muscle cells
120999162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbuf00535
]
120999162
Proteoglycans [BR:
bbuf00535
]
Extracellular matrix (ECM) proteoglycans
Others
120999162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120999162
NCBI-ProteinID:
XP_040285970
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Position
4:complement(280194769..280347446)
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AA seq
928 aa
AA seq
DB search
MKGIWNIQFALYSISFLATLVYGTIEHYTRFPFSLKFNNVQHKCPPINGGQDDLPGFDLI
SKFQIDRAASVGAIRTVVGTSPFQVAYQLGTNVDFRILTRHIYGSGLPEEYSFMFTFRMK
DTTKNKYWSIWQIVDSEGKQQAAINFNGPKKALEFSYKGADGKLNTISFAHLPFLFDTKF
HKVLFSVQKDKITLYIDCIKVDSFKLVPVGKINVDGYTILGKLKSNNEISVPFDLQWMLI
HCDPLRPERESCTELEAKRAVTQVMIQSGPPGPPGPEGPPGPPGVPGIDGIDGDRGPDGP
PGPPGSDGDSGKPGSPGLPGEPGADGLTGPEGNSGPPGSRGQKGEPGLPGSRGLSGGGVS
GPRGSPGPSGLPGELGRSGPVGDAGGRGLPGSPGPPGPPGTVALPEGDPLCPNACPPGRP
GYPGLAGMKGHKGVKGEAGEPGKQGHKGEEGEQGEIGEIGSQGPPGPQGLRGITGIIGLK
GGKGARAADGESGPRGVAGAAGDQGQRGSLGEAGPKGDRGTVGPRGITGMPGSKGESGLP
GVDGRDGIPGMPGSKGDSGEPGAPGEAGLQGLPGLPGNPGAKGVAGEKGNSGAPGVAGLM
GKSGKPGDQGPQGEVGPRGPVGPSGDRGEAGHVGPPGVPGKQGPRGAPGFLGLPGPPGLP
GHKGDRGGVGETGPKGEQGGAGEEGFGGEKGEQGEIGNSGPKGTTGSPGEPGNRGPEGGR
GLPGVEGPQGSSGPRGMQGEHGAPGLPGSQGPAGREPTDQHIKQVCMRVLQEQLANLAAS
LRRPESGAAGLPGRPGPPGPPGSPGDNGVPGHVGARGLPGLKGPPGEIGLKGPKGDSGER
GERGLPGRGPKGLPGIQGLTGEPGKPSYGRXGRDGERGPPGPAGQPGIPGPPGPAGHAGY
CDPSSCSLQAFAAPQSAKDPNMKGALSS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcatctggaacattcaatttgccttgtactcaatcagcttcctggcaaccctg
gtatatggcacaattgaacactacacaagatttccatttagtctaaaattcaacaacgtc
cagcacaaatgcccacccatcaatggtggacaggatgacttaccaggctttgatctgatt
tccaagttccagatagacagagcagcttcggtcggcgctatacggactgtggtggggaca
tcgccattccaagtggcctatcagctgggaactaatgtcgacttcaggattctgaccagg
cacatctatggcagtggactacctgaggaatattcctttatgttcactttccggatgaaa
gacaccacaaagaacaaatactggagtatctggcaaatcgtagactctgagggaaagcag
caagccgcaatcaatttcaatggtcctaaaaaagctcttgagttctcttacaagggagca
gatgggaaattgaacactatcagctttgctcatctccccttcttgtttgacaccaagttc
cacaaagttctctttagcgtgcaaaaggataaaatcacactttatattgattgcatcaaa
gtggattcattcaagctggtgccagtaggcaaaattaatgtggatggctacactatccta
ggcaaactgaagagtaacaatgaaatatctgtgccgtttgacctccagtggatgttaatt
cattgtgatcctctgagacctgagagagagtcctgcacagagctagaggccaagagagcg
gtcacccaggtcatgatccagagtgggcccccgggaccccctggaccagaaggtcctccc
ggaccacccggtgttcctggcatagatggcattgatggagacaggggtccagatggtcct
ccaggccctccaggttcagatggggattcaggcaaaccaggatctcccgggttgccaggc
gagccaggagccgatgggctgactggacctgaaggaaattctgggcctcctggatcaaga
ggtcaaaagggtgagcctggattgccaggttctcgcggtttgtcgggtggaggagtttca
gggccacggggatcacctggtccctctgggcttccaggagaattgggtcggtctggtcca
gtgggtgatgctggtggacgaggacttccaggatcaccagggccaccaggaccaccaggg
acagttgctctgcccgaaggagatcccctgtgccctaatgcatgcccaccaggccgtcca
ggatatccaggtttggctggaatgaagggccacaaaggtgtcaagggagaagctggtgaa
cctggaaaacaaggtcataagggagaagaaggtgaacaaggagaaattggtgaaattggt
tcccaaggacctccaggaccacaaggcttaagaggaattactggcataatcggactaaaa
ggaggcaagggtgctcgtgcagctgacggagaatctggtcctcgaggggttgctggagct
gctggtgaccaaggtcagagaggctcactaggagaagctggaccaaaaggcgatagggga
actgttggacccagaggaatcactggaatgccaggctcaaagggagaatcgggattgcca
ggcgttgatggccgtgatggaatccctggaatgccaggatcaaagggtgactctggagaa
cctggagccccaggagaagcaggtcttcaaggattgccaggtttgccaggcaatccggga
gcaaaaggagtagctggagagaagggaaacagcggtgccccaggtgtagctggattaatg
ggaaaatctggtaaacctggtgatcaaggacctcaaggggaagttggcccaagaggacct
gttggaccttcaggtgacagaggagaagcaggtcatgtaggcccacccggagtacctgga
aaacaaggtccacgaggtgctcctggctttttaggtctgcctggtccccctggtcttcca
ggacataaaggtgacaggggtggtgtcggggagactggacctaaaggagagcagggtggt
gccggagaagaaggatttggcggagaaaaaggtgaacagggtgaaattggaaattcaggc
cccaagggaacgactggaagccccggagagcccggtaatcgtggcccagaaggaggtcgt
ggtctgccaggtgtagaaggtcctcaaggttcttctggtcctcgtggtatgcaaggtgaa
catggtgcacctggtttaccaggaagtcagggcccagcaggtagagaaccaacagatcag
cacattaagcaagtctgcatgagagttttgcaagaacagttagcaaacttggcggctagt
ctacgaaggccagaatctggagcagctggtttaccaggacgaccgggtccaccaggacca
cctggatcaccaggagataatggtgttcctggacatgttggagcaagaggacttcctggg
ttgaaaggtcctcctggagaaattggtcttaaaggtccaaaaggtgattctggtgaaaga
ggagagagaggactaccaggcagaggtccaaaaggattgccaggaatacaaggacttaca
ggtgaaccaggaaagccaagttatggacgangaggtcgtgatggagagagagggccacct
ggccctgctgggcaacctggaattccaggaccaccaggtcctgctggccatgctggatac
tgtgatccttcctcttgcagccttcaggcctttgctgctccccagtctgctaaagatccc
aacatgaaaggggccttgagcagctaa
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