Bufo bufo (common toad): 120999202
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Entry
120999202 CDS
T07950
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bbuf01001
]
120999202 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
120999202 (TRIM28)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120999202 (TRIM28)
Protein kinases [BR:
bbuf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
120999202 (TRIM28)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120999202 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
Bromodomain
zf-RING_2
zf-C3HC4
PHD_2
PDC10_C
DUF5366
YaaC
Motif
Other DBs
NCBI-GeneID:
120999202
NCBI-ProteinID:
XP_040286012
LinkDB
All DBs
Position
1:142818890..142871619
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AA seq
789 aa
AA seq
DB search
MSATATREKRSTVTSAAAAAATNNNGDNGNEEPATDGPELLENCGVCKSRLRAEREPQLL
PCLHTMCKTCLSAEPAEANPDPGSVTINCPVCKNQCYQRDIVENYFLREDASADQVAETI
QRCTSCEDNAIANSYCVECTEWLCETCVEAHQRVKYTKDHTVKVTSGSKKEAEHTVYCPV
HKQEPLLLFCDTCDTLTCRDCQLQGHKDHQYQFLEDAVKNQRKILSALVKRLGEKHVLLQ
KSTKEVHSSIRQVIDVQKKLQVDVKMAILQIMKELNKRGKLLVNDMQKVTEGQQDKLEKQ
HWNMNKLQKHQEHILRFATWALESDNNTALLLSKKLIYFQLHRALKVVVDAVEPLGDLRF
QWDADTWTKHAEFFGKIVSDKTGVVSSTATQSLNSSQVLTPLTNFNPMVQNRARPGGSQG
RAGGPGSFMQSMDDYDGTEGESSGLDAVGGQKRGRSSEGGDVNELLKKVPRVSLERLDVD
LNPDTQPPVFKVFPGNTNEDYNLIVIERGNNGGEPVVKEEAMETGISIPTVESGEEKPYV
RPDGLPENLTPAGHPPSTTSGDAAAEFQGSSTAAVPEAVTGACKVCQKEGALLSCNQCKS
TFHRDCHLPAIIENISGDWKCMLCLEISKDEQSEVASDDATSLSAIEQKKCERVLLELLC
HEPCRPFHRLSASGDGDPMIDLTLIRAKLQQKLSPFYASPDDFVCDVWMMFRNVSKFAED
KAVVQSIIELQAFFEARLSLLFGDRKFSCLLGEAGRDDEPHSESATQRSSPVSTTSDSVS
SVKNGAEQI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaccgcgacgcgcgaaaagaggagcacggtcacctccgccgcagcagccgcc
gccactaataacaacggagataacggcaacgaggagcctgctaccgatgggcccgagctg
ctggagaactgcggggtgtgtaagagccggctgagggcagagcgggagcctcagctgctg
ccctgcctgcacaccatgtgtaagacgtgcctgagcgccgagcccgccgaggccaaccct
gaccccggatccgttacgattaactgccctgtctgcaagaatcagtgctatcagagggac
attgtcgagaactattttcttagagaggatgcttctgcagaccaagtagctgaaaccatt
cagcggtgcaccagctgtgaggacaatgccatagctaatagttactgcgtggagtgcaca
gagtggctttgcgaaacctgcgttgaggctcaccagcgtgtcaagtacacaaaagatcac
actgtcaaagtcacaagtggctctaaaaaagaagctgaacatacagtgtactgcccagtc
cataagcaagaacccctcttgctgttctgtgatacctgtgacacattgacctgccgtgac
tgccagctgcagggacacaaggatcatcagtatcagtttttggaagatgctgtcaagaac
caacggaaaatactttctgctctagtgaagagattaggagaaaagcatgttcttctgcaa
aagtccacaaaggaagttcattcttcgattcgccaagtaatcgatgtacagaagaaatta
caagtagatgtgaagatggcgatcttgcaaattatgaaggaacttaacaaacgtggcaaa
ctacttgtaaatgatatgcagaaagtcacagaaggacagcaggataaattggagaaacag
cactggaatatgaataaacttcagaagcaccaggaacacattctccgttttgccacctgg
gctttggagagtgataacaatacagccttgctgctttctaagaaattgatttatttccag
ctgcaccgtgctctgaaagtggttgtggatgctgtagagccactgggagacttaagattc
cagtgggatgctgatacctggacaaagcatgcagagttttttggtaaaattgtctctgat
aaaactggggttgtttcatcgactgcaactcagtcattgaactcgtctcaagtactgacg
ccactcaccaactttaatccaatggtgcagaatagagcaagacctgggggttctcaaggc
agagcaggtggccctgggagcttcatgcagtctatggatgactatgatggaacagagggt
gaatcatctggtttagatgccgtaggcggacagaaaaggggacgtagttcggagggtggt
gatgtaaatgaattattgaagaaggttcctcgtgtgagtttagaacgtttggatgtggat
cttaaccctgatactcagccgccagtctttaaagttttccccggaaacaccaatgaagac
tataatttaattgtgatcgagagaggaaataatggtggagagcctgttgtcaaagaggaa
gccatggaaacgggcatcagtattcccacagttgaatctggtgaggaaaaaccttacgtg
cggcctgacggtttgccagaaaacttgacgcctgcaggtcacccaccaagcaccaccagt
ggtgatgctgctgccgaattccaaggctccagtaccgctgcggttccagaagctgtaact
ggtgcttgtaaggtgtgccaaaaggaaggagcactgctttcatgcaaccagtgcaagagc
actttccaccgtgactgccatctgccagcgatcattgaaaatataagtggagattggaag
tgtatgctatgcctggaaatatccaaggatgagcaaagtgaagtggcttcagatgatgcc
accagcctctcagccatcgagcagaagaaatgtgagcgtgtgttgctagaactgctttgc
catgaaccttgtcggcccttccacagactatctgctagtggggatggagacccaatgatc
gacttgacactcatccgagccaagctacaacagaagttgtcacctttttatgcctcccct
gatgactttgtgtgtgacgtctggatgatgtttaggaacgtcagtaagtttgcagaggat
aaagcggtggtccagtcgatcattgagcttcaggctttctttgaagcaaggctcagtctt
ctgtttggtgatcgcaaattttcatgcctcctgggagaagccggacgagatgacgaaccg
catagtgaaagtgcgactcaaagaagttcccctgtgagcacaaccagcgacagcgtatct
tctgttaaaaatggtgctgaacagatttaa
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