Bufo bufo (common toad): 120999401
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Entry
120999401 CDS
T07950
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120999401 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120999401 (EXOSC10)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120999401 (EXOSC10)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
120999401
NCBI-ProteinID:
XP_040286220
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All DBs
Position
1:complement(147186680..147210990)
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AA seq
883 aa
AA seq
DB search
MAAPAAGVSSKMQKPGGSEGTEERLTEPIPGFPDTDAFVKHALGTVVGTTKASTGLPQCG
DEYDFYRSFPGFRAFCEAQGDRLLHCMSRIMQYHGCRSHLKDRGKVTALEDKYDLLVDAN
DAVLERVGILLDEASGVIRNQQPILPAGLQPPKTIVSSWNRKSDLSKKGKAETFRLLHAK
NILRPQLKFKEKIDNSNTPFVPKIFVKPNAQKPLPEVLKSRRDKQQRPEDMEVSPALADF
IHQQRMKQPEEDMFSHPYRYELDHFVPVESSLEVPEIQLYRPLNETPFHFITTLDELVQL
NEKLLQCSEFAVDLEHHSYRSFLGLTCLMQISTRTDDYMIDVLELRSDLYILNESFTNPA
IVKVLHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRNSLDHLLRFYCSVESDKKYQ
LADWRIRPLPEEMLQYARADTHYLLYIYDKMRTELRNAANGQQNLLHLVWQKSKEICLKR
FVKPIFTEESYLELYQKLKRHLNTQQLAAFRLLFAWRDKMARQEDESTGYVLPNHMLMKI
SEEVPKEPQGIIACCNPVPPLVRQQINELSLLIQQAREKPLMKSETSSAKKKGPMPNPEK
MENILFGPHDLSNTPMGQLLLDGAAVEISTGSLFSEEDPAPPAPHSPVAVRAKAVITFFS
DPEEEADELNGLSQSQMKARSILESFDNPFRMFLPSDIRGAHASQAAKCDPNTKMFEISN
RWKLVSIAQQEREAKAKEEARQRRQADKAAREKAKMEFQSKAANLKSVREQVMEEANKKR
ERVVSESGTETPKVGKKRAKHSESVKPASQAPFTPFDYSKSDFKVFAGSSNVKSQSDFDP
NKQTQQGKKNPSGKKAHQAMGNKSMSFTGGKSNRGFRHSWPKR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgctgcaggcgtgtcgagcaagatgcagaaacccgggggcagcgaggga
accgaagagcggttgacagagcccatccccggattccctgacaccgacgcgtttgtcaag
cacgctcttggaacagtcgttggcaccacaaaggcctccaccggactcccgcagtgtggg
gatgagtacgacttctaccgcagctttcccggtttccgggccttctgtgaagcacagggg
gatcggcttcttcactgtatgagtcggattatgcagtatcacggctgccgcagtcatctg
aaggatcgcggcaaagtcacggcactggaagataaatatgatttgttggtggatgccaat
gatgcggtcctggaaagagttggtattttacttgatgaggcctctggcgtcatccggaat
cagcagccaatcctccctgctggactgcagcccccgaaaactatcgtctccagctggaat
cggaagagtgacctatccaagaaaggcaaagcggagacgttccgactgctgcatgccaag
aacatcctcagaccacagctgaagttcaaagagaagatcgataactctaataccccattt
gtcccaaaaatctttgtgaaacccaatgcgcagaagccactgcctgaagtgctcaagagc
aggcgggacaagcagcagcgtcctgaagacatggaggtctccccggctcttgcagacttc
atccatcagcagagaatgaagcagcctgaggaagacatgttctcacatccatatcggtat
gaactggatcactttgttcctgtggagtcatctctagaagtcccagagatccaactctac
cgccccctgaacgagaccccctttcacttcatcaccactctggatgaactggtgcagttg
aatgagaagttgctgcagtgctcagagtttgctgtcgatctggagcatcactcgtacaga
agtttcctgggtctcacctgcctcatgcagatttctacccgcacagatgattacatgatc
gatgttctggagctgcgtagtgacctgtatatactgaacgagagcttcacaaaccctgct
attgtcaaggttttgcatggcgcagattcagacattgagtggctccagaaggactttggc
ttgtatgttgtgaacatgtttgatacccatcaagcagctcgtctactgaacctggggagg
aattctctggaccatctgctgcgattctactgcagtgtggagtctgataagaaataccag
ctggctgactggagaatccgaccactgccagaagaaatgcttcagtatgccagagccgat
acccactacctgctctatatctacgacaagatgaggacggagctgaggaatgccgccaat
ggtcagcagaaccttctccatttagtctggcaaaagagcaaagagatctgtctgaagaga
tttgtgaagccaatctttacagaggagtcctaccttgaactgtaccaaaagttaaagagg
catctcaacacacagcagctggccgccttccgccttctctttgcctggagagacaagatg
gcacgacaggaggatgagagcactggatatgtcctacctaaccacatgttgatgaagatc
tctgaggaagttcccaaggaaccccaggggataattgcctgttgtaatccagttcctcct
cttgtaagacaacagataaacgagttgtctcttctcattcagcaagctcgggagaaaccg
ttaatgaagtcagaaacaagctctgcaaaaaagaagggcccaatgccaaaccctgagaaa
atggagaatatcttgtttggtcctcatgatttatcaaacactcccatggggcagcttctt
ttggacggggcagctgtagaaatctcaacaggaagcctgttcagtgaggaagatcccgct
cctcctgcaccacacagtcctgttgctgtgcgggccaaggccgtcatcacattcttcagt
gatcctgaagaagaagctgatgagctgaacggactctctcagtcccaaatgaaggctaga
agtatattggagtcctttgacaacccattccgcatgtttcttccatccgatatccggggt
gctcatgcctcccaagcagcaaagtgtgaccccaacacaaagatgtttgaaatcagtaac
cgctggaagctagtgagcatagcacagcaagaacgagaggcaaaggccaaggaggaggcc
aggcagaggaggcaggctgacaaagctgctcgagagaaggccaagatggagtttcaaagt
aaagcagcaaatctgaagtctgtgcgcgaacaagtgatggaagaagctaacaagaagcgt
gaacgagtagttagtgaatcagggactgaaaccccaaaagtgggcaagaaacgcgccaaa
cactccgagtctgtgaaaccagcatctcaggctccatttacaccattcgactacagcaag
tcagatttcaaagtatttgcaggcagcagcaatgtgaagagtcagtctgacttcgatccc
aataagcaaactcagcaagggaagaaaaatccatcaggaaagaaggctcaccaagcaatg
ggaaataaaagcatgtccttcactggtgggaaatcaaacaggggcttcaggcacagctgg
cctaaaagataa
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