Bufo bufo (common toad): 120999424
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Entry
120999424 CDS
T07950
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120999424 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120999424 (MSH2)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120999424 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
120999424
NCBI-ProteinID:
XP_040286240
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Position
4:complement(566583729..566747777)
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AA seq
932 aa
AA seq
DB search
MAVQPKEKLSMDSGAESGFISFYYSMPEKPDTTVRVFDRNDYYTVHGGDALFAAKEVFKT
NGVIKYLGSGSKKLESVVLSKMNFESLVRDLLLVRQYRVEVYKNKSGGKSSKDSDWHLAF
KASPGNLTQFEEILFGNNDMSSAVGVVGVRLVTSEGQRLVGVGFVDSTLRRLGVCEFPDN
DQFSNLEALLVQIGPKECVMPGGDPGGDMGKIRQIVQRGGILITDRKKSEFTTKDCVQDL
NRLLKAKKGEQITSAALPEMEKQVAMSALSSVMKYLELLSDESNFGQFAMTSFDLNQYMR
LDNAAVGALNVFPGSAEDTSGTQSLAGLLNKCKTPQGQRLINQWIKQPLMDKNRIEERLN
LVEAFVTDAELRQCLQEDLLRRIPDLNRLAKKFQRQNANLQDCYRLYQAVNQLPSVIQTL
EKYEGSHQMLLLAVFVTPLTDLTSDFSKFQEMIETTMDMDQVENHEFLVKASFDPNLTEL
REKMDDLERNMQSTLSSAARELGLDPGKSLKLESNAQLGHYFRVTCKEEKALRNNKKFTT
IDIQKNGVRFTNSKLSSFNEEYIRHREEYEEAQNAIVKEIINISSGYVDPMQTLNDVIAQ
LDAVVSFAHVSNAAPMPYVRPVILEKAQGRIVLKSARHPCIEMQDDVAFIPNDITFEKGK
QMFQIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSIVDCILARVGAGDSQLKG
VSTFMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIQAFCMFA
THFHELTALADQEPTVNNLHVTALTTDETLTMLYRIKTGVCDQSFGIHVAELANFPKHVI
ENAKAKALELEEFQFVGSGRDSEDEPACKKRYTEKEEGEKIIQDFLSKVKTLPLTEMSEE
DLKLQLNQLKADVLAKNNRFVNEVISRAKTVS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcagccgaaagagaagctgtccatggacagcggggcagagagcggcttcatc
agcttctattactccatgccggagaagccggacaccacggtgcgggtgtttgaccggaac
gattactacacggttcacggcggagatgcgttatttgccgccaaggaagtcttcaagacc
aacggggtcatcaagtacctgggatcaggaagcaagaagctggagagcgtggtgcttagt
aagatgaactttgaatcgctggtgcgggatcttctccttgttcgtcagtatcgtgtggaa
gtttataagaacaagtctggagggaaatcctccaaggacagtgattggcatctggctttt
aaggcctcacccggaaacctgacgcagtttgaggagattctgtttggcaacaacgatatg
tcctctgctgttggagtggtcggtgtccggctggtcacttctgaagggcagagattggtt
ggtgttggttttgtagactccacgttgaggaggctcggagtgtgcgaatttccagataat
gaccagttttccaatctagaggctttactggttcagattggacccaaagagtgtgtgatg
cctggaggagatcctggtggagacatggggaaaataagacagattgttcagcgaggtggg
attctcattacagataggaagaagtcagagtttaccacgaaggattgtgtacaagatctt
aaccgtctactgaaggctaaaaaaggcgagcaaatcacgagtgcagcgttaccagagatg
gagaaacaggttgccatgtcagccctgtcttcagtcatgaagtatctggagctgttatca
gatgagtctaactttggacagtttgcgatgaccagctttgacctgaatcagtacatgaga
ttagataacgctgcagtcggcgcactgaacgtcttccccggatccgctgaggacactagt
gggacacagtcactggccggattgttaaataagtgtaaaaccccccaggggcaaaggttg
atcaaccagtggattaaacaacccctaatggacaagaacaggattgaagagaggttgaac
ctggtggaagcgttcgtaactgatgccgaactcagacagtgtctgcaggaagatttacta
cgacgcatcccagatctcaaccgcttggccaaaaagttccaaagacagaatgccaacctt
caagattgctacaggctctaccaggcggtgaaccagctgcctagtgtcatccagaccttg
gagaagtacgaaggtagtcaccagatgctgctgctggccgtctttgtcactcctctcacc
gatcttacttcagacttttccaagttccaggaaatgattgaaaccaccatggacatggat
caggtagaaaaccatgaatttctggtgaaagcttcttttgatcccaacttgacagaactg
agagaaaagatggacgaccttgagagaaacatgcagtctactctgagcagtgcagccaga
gagctcggtctggatcctgggaaaagcctaaaactggaatccaacgcacagctcggtcac
tatttccgggtgacgtgcaaagaggaaaaggctctgaggaacaacaagaagttcacgacc
attgatattcagaagaatggagtgaggttcacaaacagtaagttgagctctttcaacgag
gagtacattagacaccgggaggagtatgaggaggcacagaatgcgattgtgaaggaaatc
attaacatctcctctggatacgtggatccgatgcagacgctgaacgatgtcattgctcag
ttggatgcggttgtgagctttgctcacgtttcgaatgcggcgccaatgccatatgttcgc
ccagtcatcttggagaaagcacagggaagaattgtgctgaaatctgccagacacccatgt
attgaaatgcaggatgatgtggcgttcatccccaatgacataacattcgagaaggggaag
cagatgttccaaattatcactggccctaacatgggtgggaagtccacatatattcgccag
actggagtgattgttctcatggctcagattggctgctttgtaccatgcgactctgcagaa
gtgagcatagtggactgcattcttgcccgagttggagccggagacagtcaacttaaagga
gtgtctacattcatggctgagatgctagaaacagcttcgatcctcagatcagccacagag
aattccctgattatcatcgatgaactagggagagggacctcaacctatgacggctttggc
ttggcatgggccatctcagagtacatctctactaaaatccaggcgttttgtatgttcgcc
actcactttcatgaactgaccgctctggctgaccaggagcctacagtgaacaatctacat
gttaccgctttaacaaccgatgaaacgctcaccatgctctaccggatcaaaacaggtgtt
tgtgaccagagttttggaattcacgtagcggagctggctaacttcccaaagcatgtgata
gaaaacgccaaagcaaaagccttggagctagaagaatttcagtttgttggaagcggcagg
gacagcgaggatgagccagcctgtaagaagcgttacacagaaaaagaggaaggtgagaag
atcatccaggactttctttccaaagtaaaaactctgccacttacagaaatgtctgaggaa
gacctgaaactccaactgaaccagctgaaggcggatgttctggccaagaataaccgtttt
gtaaatgaagttatttcccgggcaaagacagtgtcctga
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