Bufo bufo (common toad): 121000631
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Entry
121000631 CDS
T07950
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
121000631 (VPS50)
Membrane trafficking [BR:
bbuf04131
]
Protein recycling
Others
EARP complex
121000631 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
121000631
NCBI-ProteinID:
XP_040287129
LinkDB
All DBs
Position
5:527982563..528177745
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AA seq
964 aa
AA seq
DB search
MQKIKNLMTRQGLKSPQESVHDLSPVENLQIPAKEEQREPREHATDPLAEQELINSIEEI
YFSNDSLDIVEYELEKLPPVLTLHEIEEYREKLKRQQAAVSRKVADLILEKQPSYVKELE
RVTSLQTSLQLAAVICANGRRHLNTAKEGFTEASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LCKICKNFDVTHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLPYKDLCMHITSDSYIPCLTDLCKALWEVMLSYFRTMEWHEKFDQEEPQATSDS
NSVPATEENNFDRNYIKKKLEHGLTRIWQDVQLKVKTYLLGTDMSNFKYDDFIVVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSI
LQLHEFKCLGQSRSPSMSPSKQATSADSAAVSLFEQYTSGGNPFEIQSVLKDDETEDVLA
SNGYESDELEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPSKSVSRETLRSRKRSDYSLN
KVNAPILTNTTLNVIRLVGKYLQMMTILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDAY
ESTGLGLSSSRLRTTLNRIQESLIDVEVAGENVGSLAPGEERKEKVPSPHFSQLVALTES
NTLYGLAQRVVATESLVFLAEQFEFLQTHLDSVMPAAKKPFLQQFYSQTVSTASELRKPI
YWIVAAKAIDYEQLLQLMANVKWDVKEIMSQHNVYVDALLKEFERFNKKLSDLSKHVRIP
LPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDMD
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagaacctcatgacccgtcagggcctcaagagtccacaggaaagcgtc
cacgatcttagtcctgtggaaaacctccagattccagcaaaggaggagcagcgagagccc
agagaacacgcgactgatcctctagccgagcaagagcttatcaacagcattgaagagatt
tacttttcaaatgactctcttgacattgtggaatatgagcttgagaaactgcccccggtt
ctcacactgcatgagattgaggaatacagagagaagctgaagagacagcaggctgcggtt
tccaggaaagtagcagatctgatattggaaaagcagccctcgtatgttaaggaattggag
cgcgttacgtccttgcagacgagtcttcagctggcggctgttatttgcgctaatgggaga
aggcacttaaataccgcgaaagaaggctttacggaggccagcctgggactattggcaaac
cagaggaaacggcagctattgattggcctgctgaagtctctgaggaccattaagacactg
caaagaacggacgtccgcctcagcgaaatgctggaggaagaagactaccccggagccatc
caactgtgcttggagtgtcagaaggcggcaagtacctttaaacactacagctgtataagt
gaactgaattcaaagctgcaggacactttagaacagatcgaggaacaactagatgtggca
ctctgtaagatctgcaagaactttgatgtcactcactatacaaaagtgcagcaggcgtat
agacttctggggaaaacacagacggcaatggaccagctgcacatgcacttcacgcaggca
atccacaacaccgtgttccaagttgttctgggatatgtggagctttgtgcaggaaactcg
gatacaaaatttcagaagctgccttacaaggacctatgtatgcacataacgtcagacagc
tacattccatgcttaaccgacctctgcaaagcactctgggaagttatgctgagttacttt
cgcacaatggagtggcatgaaaaatttgatcaggaggaaccccaagccacgtctgatagt
aacagtgtgcccgctacagaagagaacaattttgatcgaaattacataaaaaagaaactg
gagcacggactgacacgcatatggcaggacgttcagctgaaagtcaagacgtatctcctt
ggaacagatatgtccaacttcaaatatgatgacttcattgttgttttggatatagtcagc
aggcttatgcaggtcggggaggagttctgtggcagcaaatctgaggtcctgcaagaatcc
attaggaagcagagtgtgaactattttaagaattatcacagaacacgccttgaagagctc
cgaatgttcctcgaaaatgagacctgggagctttgcccggtcaaatccagttttagcata
ttacagttacacgaatttaagtgtttgggacaatcccgctctccgtccatgtcaccaagt
aagcaggccacttcagccgattctgctgccgtctcattatttgagcagtacaccagtgga
gggaatccttttgagatacaatccgtattgaaagacgatgaaactgaggatgttttggct
tcaaatgggtacgaatccgacgagctggagaaaagtgcttatcaggagtacgacagtgac
agcgacgtccccgaggaactaaagagagattatgttgatgagcagactggagatgcaccg
tcaaaaagtgtttccagagagaccctgaggagccgcaagagatccgattacagcctgaac
aaggtgaacgctcccatcctgacaaacactacgctgaacgtaataaggcttgtgggaaaa
tacctgcagatgatgaccatactgaagccaatcgcctttgatgtcattcactgcatgtcg
cagcttttcgactactacctttacgccgtatacacgtttttcggcagaaatgatgcgtat
gaatccaccgggcttggactgagcagcagcagactgcggaccaccctgaacagaattcag
gaaagtctcattgacgtggaagtggctggtgaaaacgtgggatctctggccccgggagaa
gaaaggaaagagaaggttccgagtccgcactttagccaactggtggcgctaacagagagt
aacaccctgtatgggctcgcccagagagtagtcgctacagagtccctggttttcttggct
gaacagtttgaatttctgcagacgcatctggactctgtgatgccggcagctaagaaaccc
ttcctgcagcagttctactcgcagaccgtgtccaccgccagtgagctgcgcaagccaatt
tactggatcgtcgctgcaaaagccatcgattatgaacagctcctgcaactgatggcgaac
gtgaaatgggacgtgaaggaaatcatgtcccagcacaatgtgtacgtcgacgccttactg
aaggaatttgagcggtttaataagaagttgtcagatctctcgaaacacgtccggatccct
cttcccgtctccaacatcctgtgggaacactgcatccggctcgccaataggacgctggtg
gaaggttatgccaatgtgaagaagtgcagcaacgagggccgagctctgatgcagctcgat
ttccagcaattcctgatgaaactggagaagttgactgacatccggccaatccctgataag
gaattcgtggagacttacatcaaagcctattacctgaccgagaacgacatggagcgctgg
atcaaggagcaccgggaatattccaccaagcagctcaccaacctggtaaacgtttgcctt
ggatcccacataaacaaaaaggccaggcagaagctgctggcagctatagacgacatggac
cggcccaaaagataa
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