Bufo bufo (common toad): 121000714
Help
Entry
121000714 CDS
T07950
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121000714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
121000714
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121000714
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121000714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_5
Apolipoprotein
Exonuc_VII_L
DUF7605
CC_BshC
Motif
Other DBs
NCBI-GeneID:
121000714
NCBI-ProteinID:
XP_040287252
LinkDB
All DBs
Position
5:complement(542076313..542079026)
Genome browser
AA seq
529 aa
AA seq
DB search
MASTELKEELNCSICLSIYTEPAMLNCGHNFCRVCISRVLDTQEEAGVYSCPECRAEHTS
RPSVQKNMKLCNIVECFLSSRPVQEQAGIFCTYCVHCPVPAVKTCLQCETSLCDVHLGAH
SKLVEHTLTEPTTSLENRKCSIHKKLLEYYCSQDATCICVSCCAFGEHRGHQVALLYEAS
KKKKEKLRKVMEKLTSKREETEKRVQSLQEHRQKVEEKASTITERVTLLFKEIREELEVL
EKKVLSEISSQEEQVCLHVTDLIQQLEVEKEELTKKMQCIEELCNVTDPLTVLQGRESET
ANCYVAEDGEHGEKKRDDKKVQAVCDLDEGLISVMLHTALTDIVTGLNVKRGFNMKVASN
IILDVNTAGDYVAVSRDLKMASWSETKQCRPKTPERFVNYHILSTRIFTTGQNYWEVETS
ESGYWMVGLAYPSIERKGDRAVTGYNKKSWCLRMSDKMHSAIHDSKINPLFPDTSVQRLG
IYLDYEAGRLSFYQVCESIRHLHTFIAHFTEPLHAAFCVYNNSWVRIRS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcttctactgagctgaaagaggagctgaactgttccatctgcctgagcatttacacc
gaacccgccatgctgaactgcggccacaacttctgccgggtgtgcatcagccgcgtcctg
gacacccaggaagaagcgggcgtttacagctgtcccgaatgccgagccgaacacacaagc
cgcccttcagtgcagaagaacatgaagctatgcaatatagtcgagtgcttcttgtcctcc
aggccggtgcaggagcaagccgggatcttttgtacctattgtgtgcattgtcctgtgccg
gcggtcaagacgtgcctacaatgtgagacttccctgtgtgacgtccacctaggggcacac
agcaagctggtggagcacacactgaccgagccaacgacgtctttggaaaacagaaaatgt
tccatccataagaaattactggagtactactgcagccaggatgctacatgcatctgcgta
tcctgctgcgccttcggagaacatcgggggcatcaggtggctcttctctacgaggcctcc
aagaagaagaaggagaaactgaggaaggtcatggagaagctgacctcgaagagagaagag
accgaaaagagggtgcaaagtttacaggaacaccggcaaaaagtggaagagaaggcatcg
accatcaccgagagggttaccctcttgttcaaggagattcgagaagagttggaggtcttg
gagaagaaggtcttgagcgagatctccagtcaagaggagcaggtttgccttcacgtgacc
gacctcatccaacaactggaggtggagaaagaagagttgaccaagaagatgcaatgcatc
gaagagttgtgcaacgtcaccgacccgttgaccgtcttgcaaggacgggagtcggagacc
gccaactgttacgtcgctgaggacggagaacatggcgagaagaagagagatgacaagaag
gtccaggccgtgtgcgatctggatgaaggtctgatctcggtgatgctacacacggcctta
acggacatcgtgaccggtctaaatgtcaagagaggcttcaacatgaaggtggcctccaat
ataatactggacgtcaacacggccggggactacgtagcggtgtcccgggacttgaaaatg
gcctcctggtcagagactaagcagtgccgacccaagaccccggagcggttcgtcaattat
cacatattaagcaccaggatattcaccactggacagaattactgggaggtggagactagc
gaatccggctactggatggtgggactggcctacccaagtatcgagagaaaaggagaccgg
gccgtgaccggctacaacaaaaagtcctggtgcctgcggatgtcggataagatgcactcg
gccatacacgactcgaagattaaccctctgttccccgacacatcggtgcaaaggctcggc
atctacctggactacgaggcgggccgtctgtccttctaccaggtgtgtgagtccatcagg
catctgcacaccttcatcgcgcacttcacagagcctcttcacgccgccttctgcgtgtat
aataattcttgggtccggatcaggagctga
DBGET
integrated database retrieval system
