Bufo bufo (common toad): 121001091
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Entry
121001091 CDS
T07950
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbuf00535
]
121001091 (COL14A1)
Proteoglycans [BR:
bbuf00535
]
Extracellular matrix (ECM) proteoglycans
Others
121001091 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Interfer-bind
Fn3_Dep-1_2nd
Fn3_VIN3
VWA_3
Motif
Other DBs
NCBI-GeneID:
121001091
NCBI-ProteinID:
XP_040287934
LinkDB
All DBs
Position
5:complement(47226425..47418256)
Genome browser
AA seq
1770 aa
AA seq
DB search
MRTGRSAHTMAFVSLLAVTFFLSNLGQSQVTPPTKLKYHVVAQDSVQISWKASKDKIKGY
KLLVTPKSDGRTNQLNLQNTATRAVIQRLDPDRSYAVQVIAFNEDDESVPVRGEFRIKDL
GKKKSSRNRKVESQNNVPEEDVQFSCKTPANADIVILVDGSWSIGRVNFRLVRLFIENLV
SAFNVGSGKTRIGLAQYSGDPRIEWNLNTYGTKEAVIDAVRNLPYKGGNTLTGLALTYIL
ENSFTPEAGARTDIPKIGILITDGKSQDDVIPPAKSLKDAGIELFAIGVKNADVNELREI
ASEPHSDHVYNVADFNIMNSIVESLTKTVCERVEDIDITIKADIVEEFGSPSELVTSEIT
ARSFRVSWTHAPGNVEKYRVVYYPTKGGQPEEVIVDGRVSTTVLKNLMSLTEYQIAVFAV
YSRSTTEGLRGAETTLALPMASDLELYDVTHRSMRAKWVGVAGATEYMILYAPLTEGLAA
DEKEMKVDGSVTDVELDGLTPSTEYTVTVYSMFGEEASDPLTGQETTLPLSAPRNLRFSN
IEHSSATVSWDHSDKNVNGYRIMYVKTGGADINDVEVRKVATTDLRKLSSLTEYTVAVFS
VFDEGQSEPLTGTFTTKPVPSPRDLNVRDITSHSFRAYWIRFAPDIIMYRLKWTPRNGGN
TQEALVKGDVTSYLMDGLTHSTEHEVSLSAIFADETESDSLSALATTLIRTTTTPTTARP
TTQVIRLGIRNLLIDEETTSSLLVSWSMTDGNIRQYLISYATANGDREETKVVSGRENEI
VLQPLLPDTEYKVSVTPVYFNGEGNPMSTSGRTLPLSPPRNLRVSDEWYNKLRITWDPPP
SSTLGYRIVYRPTSGVGPALETFVGDDVNTILILNLLSGTEYNLKVLASYSTGFGDPLTG
MGKTLFLGVTNLRSYQIKMTSICAQWQPQSHATSYRIIIESLRDESKQEANIAGGTSRHC
FYDLLPNSRYRITVYAQIDETEGPGVSIVETTSALPTAAPTRPLTPPPPPTIPAAKEVCK
STRADLVFLVDGSWSIGDDNFHKVISFLYSTAGALDEIGPDGTQVGVAQYSDDARTEIKL
KSHRNKESLLAAINAISYKGGNTKTGRAIKHVREDLFTVESGMRKGVPRVLVVITDGRSQ
DDAIKLAYEMQQEGFSIFAIGVADADYAELVNIGSKPSERHVFFVDNFDAFKKIEDELIT
FVCETAKATCPWAYIQGNSVTGFKMLEMFGLVEKEYAALDGVSMEPGTFNNFPCYRIHKD
ALVSQPTKYIHPEGLPSDYTVSFLFRILPDTPKEPFALWEILNKEYEPLVGVILDNNGKT
LTYFNYDSKGQFQTITFEGPEVKKIFHGSFHKVHIVISKTTSKLVIDCKQVDEKPINGAG
NITVDGVEVLGRMVRSRGPKDNSAPFQLQLFDIVCTSSWASRDKCCELPALRDEATCPPL
PNSCSCSQENKGLPGPPGPPGGSGMRGSKGSSGEKGPPGPEGPRGPVGAPGQHGPPGPQG
PNGHSIQGPPGTPGTKGEKGEAGAQGIQGPSGPSGAPGRDGNEGPRGMLGKDGATGSAGP
PGPMGAPGNPGSPGVPGSTGPQGDSGTPGSPGQKGERGERGDTQSQNMVRVIARQVCEQI
IQSHMSRFNSLLNQIPSQSVSVRSIQGPPGEPGRQGPAGQPGEQGSPGRAGFPGNPGSPG
PPGERGLSGEKGERGNPGVGTQGPRGPQGPSGPPGEGRTGSQGPSGPPGQRGLPGPQGNL
GPMGPPGPPGYCDASSCAGYGLIPYNDYQP
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggggcgcagtgcacacacgatggcctttgtgtcgctccttgcggtgacattt
ttcttatccaatcttgggcagagccaagtgactccaccaacaaaattaaagtaccatgta
gtagcacaggatagtgtacagatttcatggaaggcctccaaagataaaattaaaggttat
aaactgcttgtgaccccaaaatcagatgggagaaccaaccaactaaatcttcaaaacaca
gcgacccgagcagtcatccagagacttgatcctgatcgcagttatgccgtgcaggtcatt
gcatttaatgaagatgatgaaagtgtgccagtgcgaggagaatttagaatcaaagatttg
gggaaaaaaaagtctagtagaaatcgtaaggttgaaagtcaaaacaatgtcccagaggaa
gacgtgcaattttcttgtaaaactccagcaaatgcagatatagtgattctggtggacggc
tcgtggagtataggtcgagttaattttagacttgtccgcctattcatagagaatctggtc
agtgcattcaacgttggcagcggtaaaaccagaataggtttggcgcaatacagtggagat
cccagaatagaatggaacctgaacacctatggcaccaaagaagctgttatagatgctgtc
cgtaacctgccttataaaggtggaaacacactcacagggctggccttaacctacattctg
gaaaatagctttacgccagaagcaggggcaagaacggatattccaaagattggtattttg
attacagatggaaaatctcaagatgatgttattccacctgccaagagcctgaaagacgca
ggaattgaactgtttgctattggtgtaaaaaacgctgatgttaatgagctgagagagatc
gcctccgagccgcacagtgaccacgtttacaatgtggccgacttcaacatcatgaactcg
attgttgagtctcttacgaaaactgtgtgtgagagagtggaggatatagacataaccatt
aaagcggacatagttgaggagtttggctctccatctgaattagtcacgtcagaaataaca
gcaagaagtttccgcgttagttggactcacgctccaggaaatgtcgaaaaataccgtgtg
gtgtattatccaactaagggaggacaaccagaagaggtcatagttgatggcagagtgtcc
accactgtactcaagaacttgatgtctctgacagaatatcaaatagctgtgtttgctgtg
tactcaaggagtacaacggaaggcctgcgcggtgctgaaaccacattggcattaccgatg
gcatctgatctcgagctatatgacgtcacccacagaagtatgagggcaaaatgggttggt
gttgcaggtgctactgagtatatgatcctctatgctcctctcaccgagggattggctgca
gatgaaaaagagatgaaggttgatggttcagtgacagatgttgagttggatggattgact
cccagcacagaatacacagtcacagtctattcaatgtttggagaagaagccagcgatcca
ctcaccgggcaagaaaccacattaccactaagtgcacctagaaacctccgattttctaat
attgaacacagcagtgccacagtctcttgggaccactctgataagaatgtgaatggatat
cgtattatgtatgtgaaaaccgggggtgctgacatcaatgatgtggaagtcagaaaagtt
gcaaccaccgacttaaggaagttatcctcgttgaccgaatacacggtggccgtcttctct
gtttttgatgaaggacaatctgagcccctcactggcactttcaccaccaagccagtgccc
tctcctcgtgatctgaatgtgagagatataacctcacacagtttcagagcttactggata
cgctttgctccagatattataatgtacagattgaaatggacgccccgcaatggtggtaac
actcaggaggctcttgtaaagggagatgtcacctcctatcttatggatggcctaacacac
agcacagaacatgaagtttccctgtccgctatatttgctgatgaaactgaaagtgattcc
ttatcagctttggctacaactttgataaggactacgactactccaactacagcaagacct
acgacacaagtgatccgcttgggtatcagaaaccttttaatagatgaagagaccacatcc
agcctcctcgtttcatggtctatgacagatggcaacattcgccaatacctcatatcctat
gctactgcaaatggagatcgtgaagaaacgaaagttgtgtctggaagggaaaatgaaatt
gtgttgcagcctttgctgcctgacactgaatacaaagtcagcgtgacccccgtttatttc
aatggagaaggaaatcctatgtcaacatctggaagaacgttgcccttatctcctccccga
aatctgcgtgtttctgatgaatggtacaataagctgaggattacatgggaccccccgcct
tcctccaccttgggttacagaattgtatacaggcctacaagcggagtcggcccagccctg
gagaccttcgttggagatgatgtgaacaccattctcattctcaaccttctcagtgggacc
gaatacaacttaaaagtcctggcgtcctattcgactggattcggtgaccctttaactgga
atgggcaaaacactgtttcttggagtgacaaacctgagatcctatcaaattaaaatgacc
agcatttgcgctcagtggcagccgcagagccatgccacatcctatagaatcatcatagag
tcactgagagatgaatcaaagcaagaagccaatattgctggaggaacatctagacactgt
ttctatgaccttctaccaaactctagatacaggatcaccgtttatgcacaaattgatgag
accgaaggtcccggcgtgagcattgtggagactacatcggcacttccaactgcggcaccc
acccgaccactaacgccacctcctcctccgactattcctgctgctaaagaagtgtgtaaa
tctaccagagctgatctcgtctttcttgtggatggatcgtggagtatcggagatgacaac
ttccacaaagtcatcagtttcctgtacagcactgccggagccctggacgagataggccca
gatggaacacaagttggggttgctcagtacagtgatgacgccaggaccgaaattaagtta
aaatcccatagaaacaaggagtcccttttggcggcaatcaatgccatatcttacaaagga
gggaatacaaaaacaggcagggcaatcaagcacgtccgagaagacctgtttaccgtggaa
tccggtatgaggaaaggtgttccaagagtcctggtggtgattaccgatggacgctctcaa
gatgacgccatcaaacttgcttatgaaatgcagcaggaaggcttcagcatttttgcgatc
ggagtggcggatgcagactatgcagagttagtgaacattggcagcaagcccagcgagaga
cacgtgttctttgtcgacaactttgatgccttcaagaaaatagaagatgaattgatcact
tttgtctgcgagacagcaaaagcaacttgtccatgggcttacattcaaggcaacagtgtg
acagggttcaaaatgttggaaatgtttggcttggtggagaaggaatatgcagccttggat
ggggtctctatggagcctggaaccttcaataacttcccatgttacagaatacacaaggat
gcactggtgtctcaacctaccaaatatattcatccagagggacttccttcagattatact
gtttccttccttttccgaattcttcctgacacccccaaagaaccatttgcactctgggag
atcttgaataaagagtatgagccactagttggtgtaatacttgacaacaatggcaagacg
ttaacatatttcaattacgacagtaagggacagtttcagaccattacctttgaaggcccg
gaggtcaagaagattttccatggcagtttccacaaggtacacatagtaatatccaagacg
acttcgaaactggtcattgactgcaaacaagtggacgagaagccgataaatggagctgga
aacatcacagtcgatggcgtagaagtcttgggaagaatggttcgatcaagaggaccaaag
gacaactctgccccgttccagctccagttgtttgatattgtttgtacatcttcttgggcc
agtcgagacaaatgctgtgaacttcctgcactgagagatgaggccacctgcccaccactt
ccaaactcctgctcctgctcccaggaaaataaagggttacctggacctccaggacccccg
ggcggatcaggcatgagaggctccaaaggatcttcaggagaaaaaggtccacctggacca
gaagggccccgaggcccagtaggtgcaccaggacaacatggaccacccggaccccaagga
ccaaatgggcattctattcaaggaccgcctggaacacctggaaccaaaggggaaaaggga
gaagctggagcccaaggaattcaggggccttccggaccatcaggggctcctggacgtgat
ggaaacgaaggaccacggggaatgctaggaaaagatggcgcaactggctcagcaggacct
ccaggcccaatgggtgcaccaggcaacccaggatcccccggtgttccaggcagcacagga
cctcagggagattcaggaaccccgggttctccaggccaaaaaggagaaagaggagaaaga
ggagatacccagtcccagaacatggtgcgtgtcattgctcggcaagtgtgtgagcagatc
atccagagtcatatgtcaagattcaattcacttctgaaccaaataccaagtcagtctgta
tcagttaggagcattcagggaccaccaggggaaccgggccgacaaggtcctgcaggacaa
cctggagaacagggatcacctggacgagcaggatttcctggcaatcctggaagccctgga
ccgccaggagaaagaggtctatctggtgaaaagggagaaagaggcaacccaggagttgga
actcaaggcccacgtggtccccagggaccttcaggacccccaggagaaggaaggacagga
agccaaggaccttctgggccaccgggacaacgtggattgccaggcccacaaggaaatctt
ggtcctatgggaccacctgggcccccaggttactgcgatgcttcttcgtgtgctggatat
ggcttaataccttacaatgactaccagccttga
DBGET
integrated database retrieval system
