Bufo bufo (common toad): 121001095
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Entry
121001095 CDS
T07950
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbuf03009
]
121001095 (DCAF13)
04121 Ubiquitin system [BR:
bbuf04121
]
121001095 (DCAF13)
Ribosome biogenesis [BR:
bbuf03009
]
Eukaryotic type
90S particles
Other 90S particles
121001095 (DCAF13)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121001095 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
KNTC1_N
MIOS_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
121001095
NCBI-ProteinID:
XP_040287946
LinkDB
All DBs
Position
5:47963553..47994452
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AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDEYVRETKKDLPRVPRNYDPSLHPFEVPREYVRALNATKLERVFAKPFVA
ALEGHRDGINCMAKHPKSLSTVLSGACDGEVKIWNLTTRKCTRTVQAHEGFVRGMCVRFC
GTSFFTVGDDKTVKQWKMESPGYGEKEEPIHTVLGKSVFTGVDHHWRKAVFATCGQQVDI
WDEQRTSPMRSYTWGVDSITSVKFNPVETHVLGSCAADRSIVLYDIRKPTPLKKIILEMR
TNALCWNPMEAFIFTAANENYKLYTYDMRNMEAPVCVHMDHVSAVLDVDYSPTGKEFVTA
SFDKSIRIFTSTSGHSREVYHTKRMQHVTCVRWSSDNKYILCGSDEMNIRIWKANASEKL
GLLSPRERAAENYNQKLKEKFKHHPQIRRISRHRHLPRPIYSQIHEQRVMKEARRKKDLN
RRKHSKKGTVPIIPEKKKHVVAVLE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaggtgctgtgcaggaatccggatgaatacgtgcgggagaccaaaaaggat
ctgccccgagttccacgtaactatgacccctcgctccacccatttgaagtaccgcgtgaa
tacgtcagagccttaaatgccaccaagctggagcgggtgtttgccaagcctttcgttgca
gcactggaaggtcacagggatgggatcaactgtatggcgaagcatcccaagagcctgtcc
acagtgctctcaggggcctgtgatggagaggtgaagatttggaatctgaccacacgaaaa
tgcacgcgaacagtacaagcgcatgaaggctttgtccgaggaatgtgtgtccgattctgt
gggacttctttttttacagttggtgatgacaaaactgtgaagcagtggaagatggaaagt
ccaggatatggcgagaaagaggagccaatccacaccgttctagggaagtcagtctttaca
ggcgtggaccaccactggaggaaggctgtgtttgctacgtgtggacagcaagtggatatc
tgggatgaacagaggacctctcctatgcgatcctacacctggggagttgacagcatcacc
tctgtgaaatttaatcctgttgagacacacgtattaggaagctgtgctgctgataggagt
attgtcctgtatgacatacggaagccaacaccactgaaaaagattattctagaaatgagg
acaaatgcgctctgctggaaccctatggaagccttcatttttacagcagctaatgagaac
tacaaattgtacacatatgacatgcgaaacatggaagcccccgtatgtgtacatatggac
catgtgtcagctgtcctggatgttgactactctccaaccgggaaagaatttgtgaccgcc
agctttgataaatcaattcgcatctttacctctacaagtgggcacagcagggaagtgtat
cacacaaagaggatgcagcacgtcacctgtgtccggtggtcttccgacaacaagtacatt
ctctgcggctcggacgaaatgaacatccgtatttggaaagcaaacgcctccgagaaactt
ggcctgttatcaccacgagagagggctgcagagaactacaaccagaaactgaaggaaaaa
ttcaagcatcacccccagatcaggagaatctcccgccacagacacctccccaggcccata
tacagccagatacacgagcagcgcgtcatgaaggaagctcgccgcaagaaggatttgaat
cggcgcaaacacagcaaaaagggcacggtgcccatcataccagagaagaagaagcatgtg
gtggcagtactggaatga
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