Bufo bufo (common toad): 121001174
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Entry
121001174 CDS
T07950
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121001174 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121001174 (DROSHA)
03009 Ribosome biogenesis [BR:
bbuf03009
]
121001174 (DROSHA)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121001174 (DROSHA)
Enzymes [BR:
bbuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
121001174 (DROSHA)
Messenger RNA biogenesis [BR:
bbuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
121001174 (DROSHA)
Ribosome biogenesis [BR:
bbuf03009
]
Eukaryotic type
90S particles
RNase
121001174 (DROSHA)
Prokaryotic type
rRNA processing factors
121001174 (DROSHA)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
121001174 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
121001174
NCBI-ProteinID:
XP_040288053
LinkDB
All DBs
Position
5:322322514..322674161
Genome browser
AA seq
1327 aa
AA seq
DB search
MSLETGREGQSARGGQTASMQTYRPQNVRPTQLQPSSGQYSYDTQSAPPPMFSSLPNTSY
MPPRPDYMCYPPPVTPPTQSTVNQCLPRPTYPVRQSYPMPPCFPPVPPSTLGPSNPPPAG
PPTAQSTYPYMVPPLMPPPPIMPPPLPHVGYQPVYPSGYPPQSFPPPPPPLQPVSNFSSY
QQNSASFQGSSHYRHTSHSQYQADKPQSDHRAADRVKHYDAHRLREYSHSDRHRSEKHCD
RRDRGRSPDRTRRSDSSRRRSEYEYSRTPSHGRTPPRHGSYERSRDRHRHRESRRSPSPG
RSYRKRPKSPSPTRDRKKARWEEEEKNTASESPSSRKENSYTLLKDKELLDDGLLDRNDE
EDEDLLKPVWVRCTHSESYYSSDPMDQVGDSTVVGTSRLRDLFDKFEEELGKRQSKARAA
RPAWEPPKTKLDEDLESSSDSDCDTDDDSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELW
YNDPGQMNVGPLCKCSIKAKRTGIRHSIYPGEESIKSCRPMTNNAGRLFHYRITVSPPTN
FLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPEHFCVK
GLEVFSSYLFRDILELHDWNLIGPPVEETSSKCPQFHFMPRFVRFLPDGGKEVLSMHQVL
QYLLRSNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPEMKPSSVRIDQLDREQFN
PEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLVQREE
ALQKIRQKNTMRREVTVELSSQGFWKSGIRSDVCQHAMMLPVLTHHIRYHKCLMHLDRLI
GYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHYMHMRKKGIN
TLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYFLFPNLEEGGLATYRTAI
VQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALMGAVYLEGGLEEAKQL
FGRVLFFNQDLRDVWLNYPLHPLQLQEANTDRQLIETSPVLKKLTKFEDVIGVKFTHIRL
LARAYTLRTVGFNHLTLGHNQRMEFLGDSIMQLVASEYLFIHFPGHHEGHLTLLRSSLVN
NRTQAKVAEELGMQEFAIANDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNV
CFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVY
FKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRLEREQQD
NTEDVRK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggaaacaggaagagaagggcaatcggctagaggaggtcagacggcttcgatg
cagacataccggccacaaaatgtaaggcccacccagttacagccatcttctggccagtat
tcctatgatacccaaagtgctccacctcccatgttttctagccttccaaatactagttac
atgcctcctaggccggattacatgtgctacccaccgcctgtgactccaccaacacaaagt
actgtaaaccagtgtctgcccaggccaacgtatcctgtcaggcaaagttacccaatgcca
ccctgttttcctcctgtccctccttctactcttgggccaagtaatcccccgcctgcgggc
cctcccactgcacaaagcacttatccttacatggtgcctcctctaatgccgccgccacct
attatgccccctcccttgccccatgtaggctatcaaccagtatatccctctggttatccg
ccacagtcttttccaccacccccacccccactgcagccagtatctaactttagtagctac
caacagaattcagcctcttttcagggcagtagccattaccggcacactagtcacagtcag
taccaagccgacaaaccacaaagcgatcacagggcagcagatagagttaagcactatgat
gctcatcgactcagagagtacagccatagtgacagacatcgttctgaaaaacattgtgat
cgaagagatcgtggaaggagtcctgaccggacaagaaggtcagacagcagtcgacgtaga
tcggagtatgaatacagtaggaccccgtctcatggaaggacccctccccgacatgggagt
tatgaacgaagcagggataggcacaggcatcgggagagtcgaagatcaccaagtccaggc
agaagttatcggaagaggccaaaaagtccttcccctactagagatcgtaagaaagcaaga
tgggaagaagaagaaaagaatacggcctctgaaagtccatcgtcccgcaaagaaaacagt
tatactttgctgaaagacaaggagcttctggatgacggcctgctggaccgaaatgatgag
gaagatgaggatttgctaaagcctgtgtgggtccgttgcacccactctgaaagctactac
tctagtgatccaatggaccaagtaggcgattccacggtggtcggcacaagcaggttacgg
gatttgtttgacaagtttgaagaagaacttggcaagcgtcaatcaaaagctagagctgct
aggccagcgtgggagccaccgaagaccaaattagatgaggatttagagagctccagtgac
tctgactgtgatacagatgatgacagctgctccagcagctccgattcggaggtctttgat
gtgattgctgaaataaagaggaagaaagctcatcctgatcgtcttcatgaagaactgtgg
tataacgaccctggccagatgaatgttggtcccctatgcaagtgcagcattaaagccaaa
cggacggggatccggcacagtatctatccaggagaggagtcgatcaaatcgtgccgtccg
atgaccaacaatgcagggcgcctttttcactacaggattacagtgtctccaccgacaaat
ttcttaactgaccggcccacggtgatagagtatgatgatcacgaatacatctttgaaggc
ttttctatgttcgctcatgctccactcacaaacattcccctgtgcaaagtaatccggttt
aacattgactacacaattcatttcattgaggaaatgatgcccgagcatttctgtgtgaag
ggactggaagtgttttcctcctatctgttcagggacatattagagcttcatgactggaat
cttattggtcctcctgttgaagaaactagctccaaatgcccacagtttcattttatgcct
cgctttgtaaggtttctgccagatgggggtaaagaagttctctccatgcaccaagtcctg
cagtacttactaaggagtaacaaggctttagtgccggaagaagagattgcaaacatgctc
cagtgggaggaacttgaatggcagaagtatgcagaagaatgtaaaggaatgattgtcacc
aacccggaaatgaaaccaagctcagttcgaattgatcagcttgaccgggagcaatttaat
ccagaagtaattacgttccctattattgtccatttcggtataagacctgcccagctcagc
tatgccggagacccacagtaccagaagctatggaaaagctacgtgaaactgcgccatcta
ctggctaatagccccaaagtcaaacaagctgataagcagaaattggtccagagggaggag
gctcttcagaagatcagacagaagaacacaatgaggcgtgaagtgacagtagaactgagt
agccagggtttttggaaatctggcattcgctcggatgtctgccagcatgcaatgatgctg
ccagtgctgacccatcacattcgctatcataagtgccttatgcatttagacagactaatt
ggatatgtgtttaaggagcgctgtttgctgcagctggcaatgactcatccgagtcaccat
ttaaattttgggatgaaccctgatcacgcccgcaactctctttctaattgtggaattagg
cagccaaaatatggagatcgtaaagtccattacatgcacatgcggaaaaagggaataaat
acgctgataaacatcatgtcccgtctggggcaagatgatccaaccccttcacgaataaac
cataatgaacggttggagttcttgggtgatgctgtggttgaatttttaacaagtgtccac
ctgtactttctgtttcctaatcttgaggaaggaggtttggctacgtataggacggctatt
gttcaaaatcagcatcttgcaatgttggctaagaagttggagctggatcgtttcatgctg
tacgcacacggaccagacttgtgtagagagtcagatctgcggcatgccatggccaactgc
tttgaagcattaatgggggcggtgtatctggaaggtggccttgaagaagcaaagcagcta
ttcgggagagttctgttttttaatcaggacctgcgggacgtgtggcttaattatccacta
caccctcttcaactgcaagaggctaacactgatcgacaactgattgagacatcaccggta
ctaaagaagctgaccaaatttgaagacgtgattggagttaagtttacgcacatacgactt
ctggctcgagcatacaccttgagaacagtgggatttaaccatctgaccttaggccacaac
cagaggatggaattcttgggcgactctataatgcagctggtagcctccgaatatttattc
atccatttccccggtcatcacgagggccacttaacgctgctgcgtagttcactggtgaac
aacaggactcaggccaaggtagcagaagagctgggtatgcaggagtttgccattgctaat
gataaaacaaagagacctgtggccctcaggaccaaaactttggctgacctgcttgaatct
tttattgctgcactttatatcgacaaggacttggaatacgttcacacatttatgaatgta
tgcttcttcccaagactcaaggagttcattttaaatcaagactggaatgatccaaagtca
cagcttcagcagtgttgtctgaccctgagaactgaagggaaggaaccagacatccccctc
tacaagactcttcaaactgttggaccttctcacgcaaggacgtacaccgttgcggtgtat
ttcaaaggcgaacgcattggctgcggtaaagggccgagtattcagcaggctgagatgggg
gctgccatggacgccttggaaaaatataacttcccccagatggctcatcagaagcgtttt
atcgaacggaagtacaggcaggaattgaaagaaatgaggttggagagggagcaacaagac
aacacagaggacgtgagaaaataa
DBGET
integrated database retrieval system
