Bufo bufo (common toad): 121001229
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Entry
121001229 CDS
T07950
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03018
RNA degradation
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121001229 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
121001229 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121001229 (LSM5)
03041 Spliceosome [BR:
bbuf03041
]
121001229 (LSM5)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121001229 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
121001229 (LSM5)
Spliceosome [BR:
bbuf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121001229 (LSM5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
121001229
NCBI-ProteinID:
XP_040288133
LinkDB
All DBs
Position
5
Genome browser
AA seq
91 aa
AA seq
DB search
MAANVTTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEM
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaatgtcaccaccaacccttcacagttacttccgctcgagctagtggataag
tgtataggatctcgtatccacattgtcatgaagagcgataaggagattgtcggcacgctg
ctggggttcgatgattttgttaatatggtactagaagacgtcactgaatttgagatcacg
cctgaaggaagacgaattacgaagctagatcaaattctgttaaatggaaacaatataaca
atgcttgtacctggaggagaaggtccagaaatgtaa
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integrated database retrieval system
