Bufo bufo (common toad): 121001520
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Entry
121001520 CDS
T07950
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121001520 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121001520 (CNOT3)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121001520 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121001520 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
Motif
Other DBs
NCBI-GeneID:
121001520
NCBI-ProteinID:
XP_040288560
LinkDB
All DBs
Position
1:178036933..178100495
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AA seq
724 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDALNMGVDQFESEVESLAVQTRKKKGDKDQKQDRIEGLKKQIEKHRYH
IRMLETILRMLDNDSINVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALA
ATSPPGHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKIRGRSTDSEVGQ
SPAKNGSKSIHNNHHPQSPAVTPSYQIGSSSSTSSLGNGPGTNSNGAVSNSSSTSSNSST
NSKNNPSSGHTSGTPTPYAQAVAPPPSSTNTSQPRPPSAQQNTSKQNGATSYSSVVAENS
ADTALSNSSQSQSSQSVIHNPPTSTAKETNSVSQPTSSSSTSTGPSLLLPLNVNPPSSPT
PTFSDPKPSQPLLNGPPQFSSTPEIKAPEPLSTLKSMAERAAIGTNLEDPVPAIHLPERE
ILITTTTTQPPATQPSSQLSEVNIPLSLGVCPLGPVPLTTDQLYQQAMEDAAWHHMPHPS
DSERIRQYLPRNPCPTPQYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAK
ALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLED
RDLQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagagaaaactacagggagagattgatcgctgtttgaaaaaggtgtcagaa
ggggtggagcagtttgaagacatttggcaaaagctacataatgcagcaaatgccaatcag
aaagagaaatacgaagcagacttgaagaaggagattaagaagctacagagattgcgggac
caaataaagacatgggtggcatccaatgagatcaaagacaagaggcagcttattgaaaat
cgaaaactaatagaaacgcaaatggagagattcaaagtggtagaacgtgaaacaaagaca
aaagcctactctaaggaaggtcttggtcttgctcagaaggttgacccagctcagaaggag
aaggaagaagttggacagtggttaacgaacacgattgacgccttgaacatgggagtggat
caattcgaaagtgaggtagagtctttggcagtacaaacacggaaaaagaaaggagacaag
gatcagaagcaggaccggatcgagggactgaagaagcagattgaaaaacatcggtaccac
atccgaatgctggaaaccattctgcgaatgttagataatgactcaatcaatgtggatgca
atcaggaagattaaagatgacgtagaatactatgtggactcttcacaagatccagacttt
gaagagaatgagttcctgtacgatgaccttgatttagaagacattccacaggcgctggca
gctacttccccaccaggtcacagtcacatggaggatgagatcttcaaccagtctagcagc
actcccacctctaccacatcaagctctcctattccaccaagtcctgccaattgcaccaca
gaaaattctgaagatgacaagaaaatcagaggcaggtctacagacagtgaagtcggtcag
tcaccagcaaagaacggttctaaaagtatccataacaaccatcatccgcagtcccctgca
gtgacgccaagttaccaaataggaagcagttccagcacgtcatctctcggaaatgggccg
ggtacaaacagcaatggagctgtatcaaacagcagcagtacgagcagcaacagcagcacc
aacagcaaaaacaacccgtccagtggacacacgtctggtacacctacaccttatgcacag
gcagtggctcctccaccatctagtacaaatacatcacagccgaggccacccagtgcgcag
caaaatacaagcaagcaaaatggagcaacaagttatagctctgtagtagcagaaaattca
gcagatactgcacttagtaatagcagtcaatcacaatccagccagtctgtgattcacaat
ccaccaaccagcactgcgaaagagacaaacagtgtgtcacagccaaccagcagcagtagt
accagcactgggcccagcttactattacccttaaatgtaaatcctcccagttcgccaacg
cccaccttcagtgaccctaaaccaagccagccactactaaacgggccacctcagttcagc
tccacaccagagatcaaggcaccggagcctttaagtacactgaaatccatggcagaacgt
gcagctattggaactaacttggaagatccagtccccgctatccatctgcctgagcgagaa
attcttatcactacaaccacaacgcagcctcccgccactcagccctcaagtcagctttca
gaagtgaacatccctctttccctgggtgtgtgtcctttgggtcctgttccccttacaaca
gatcagctttaccagcaagcaatggaagatgcagcctggcatcatatgcctcacccctca
gattcggagagaatacggcaatacctcccacggaatccttgcccgacgccccagtatcac
caccagatgcccccgcctcattcggacacagtagaattctaccagagactttccacggag
acactcttctttatcttttactatctggagggcactaaagcacagtatttagctgctaaa
gccttgaaaaagcagtcgtggaggtttcacaccaaatacatgatgtggttccagagacac
gaggagcccaagacaataacggatgagtttgagcaggggacatatatttactttgactat
gaaaaatggggccagaggaagaaggaaggattcacgtttgaataccgttacctggaggat
cgtgacttacagtga
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