KEGG   Bufo bufo (common toad): 121001627
Entry
121001627         CDS       T07950                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf03013  Nucleocytoplasmic transport
bbuf04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121001627 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    121001627 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbuf03019]
    121001627 (SEH1L)
   04131 Membrane trafficking [BR:bbuf04131]
    121001627 (SEH1L)
Messenger RNA biogenesis [BR:bbuf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121001627 (SEH1L)
Membrane trafficking [BR:bbuf04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    121001627 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N DUF8589
Other DBs
NCBI-GeneID: 121001627
NCBI-ProteinID: XP_040288727
LinkDB
Position
5
AA seq 416 aa
MFVARSISADHRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKPRGQSHWVKRTTLVDSRTSVTDVK
FAPKHIGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRSHSP
TIAVGSDDSSPNIMGKVQIYEYNENTRKYVKAETFMTVTDPVHDIAFAPNLGRSFHILAV
ASKDVRIFTMKPLRKELTSSGGVTKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDDG
SVRLWKANYMDNWKCTGVLKGDGNPVTSNQQGFSGSSVGSTNQSLPNSVNGSSSSRRSFL
HLDNSKVGSRWSSYAPFIPSPVVNPCETDPTSLTRHPPRRRNNLPPLNPLPEQQGL
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgttcgtggctcggagtatctcggcagatcacagagatcttatccacgatgtctccttc
gattttcatggcaggagaatggcgacgtgctccagtgatcaaagcgtgaaagtgtgggac
aaaagtgaaaatggtgactggcactgtaccgccagctggaagacacacagtgggtcggta
tggcgtgtaacatgggctcatccggagtttggacaggtgctggcttcatgttcatttgac
agaactgctgcagtgtgggaagaaatcgtaggcgaatcaaatgacaaacctagaggacaa
agtcattgggtcaaaagaacgacacttgtggatagcaggacatcagtaaccgatgtcaag
tttgcccccaagcatattggcttaatgttggcaacctgctctgcagacggtgtggtgaga
atatacgaagctcctgatgtcatgaatcttagccaatggtctctgcagcatgaaatatcc
tgtaaattgagctgcagttgtatttcctggaacccatctagttcccgatcacattctccg
accatagccgtgggaagtgatgacagcagccctaatataatgggaaaagttcagatctat
gagtacaacgagaacacaaggaaatacgttaaagcggaaacctttatgacagtcacagac
cctgttcacgacattgcttttgctccaaacctgggcagatctttccacatcttggctgta
gcaagtaaagatgtaagaatctttacaatgaaacctctgaggaaggaattgacctcttca
gggggagtcacaaaatttgaaattcacacagtggcgcagtttgataatcacaactcccaa
gtgtggcgtgtaagctggaacataactggcacagtcctggcatcttctggtgatgatgga
agtgttcgtctgtggaaagcaaactacatggataattggaaatgcactggtgtcctcaaa
ggagatgggaaccctgtgacttccaaccagcaaggattttctgggtcctctgttgggtcc
accaatcagagtttacctaactcagttaatgggtcgtcttcatccaggcgttcctttctc
cacttggataattcaaaagttggctcaagatggtccagttatgctccatttataccttct
ccggtagtaaacccttgtgagactgacccaaccagccttacccgtcatccgcctcgcagg
cgaaacaatctcccaccgctaaatcctttacctgaacaacaaggattgtaa

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