Bufo bufo (common toad): 121001632
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Entry
121001632 CDS
T07950
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbuf03016
]
121001632 (CDKAL1)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
121001632 (CDKAL1)
Transfer RNA biogenesis [BR:
bbuf03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
121001632 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
121001632
NCBI-ProteinID:
XP_040288734
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All DBs
Position
5:394589632..395553313
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AA seq
576 aa
AA seq
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MPASCESLVDDIEDIISVSDPKPHDRQSARQNVVPRVRKRNKDQVLEEPPSDSTIPGTQK
IWIRTWGCSHNNSDGEYMAGQLAAYGYKITEHAELADLWLLNSCTVKSPAEDHFRNSIKK
AQEENKKVVLAGCVPQAQPKQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYSIEELVDRAKQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKARVPGITIATDIICG
FPGETDEDFKETLKLVEEYRFPSLFINQFYPRPGTPAAKMVQVPAHVKKQRTKELSQLFH
SYNPYDHKIGQRQQVLVTEESFDLQYYVAHNRYYEQVLVPKEQTFMGKMVEVEIFEAGKH
YMKGHPLSDSKVYTPSIAQPLEKGKVSGLSEECKSLLNNGSSSRGKPPDERSEAFLQTSW
GKKEEQMKIVYFLVAVFAVLIAFLGAKLYQIEILGN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcttgtgaatcactagtggacgacattgaagacatcatctcggtatccgat
ccaaaaccccatgatcgtcagtcggcaagacaaaacgttgttcccagggtacggaaacga
aataaggaccaagtcctggaagagccgccaagtgacagcaccattccaggcacgcagaag
atctggatacgtacatggggttgctcacataacaactctgatggagaatacatggcagga
caattggcagcatatggctacaaaattacagagcatgccgaactggcagatttgtggcta
ctgaatagttgtactgtgaagagtccagctgaggaccacttcagaaattccattaaaaaa
gcacaagaagagaataaaaaagttgttctggctggatgtgttcctcaggctcaaccaaag
caagactacttgaaaggccttagtataattggggtccaacagatcgatagagtagtggaa
gttgtagaagaaacaataaaaggtcactcggtgcgactgctgggtcagaaaaaggataat
ggaaaacggttggggggagctcgattggatttgccaaagattaggaagaacccactgata
gaaatcatttccatcaatacaggctgcttaaatgcgtgcacatactgcaagacaaaacat
gctagaggagagctcgccagttactcgatagaagagttggtcgatcgcgcaaagcaatcc
ttccaagagggtgtctgtgaaatctggctgaccagtgaagacaccggggcgtacggcaga
gacattgggacagatcttcctactcttctttggaagctggttgaagttatccctgaaggt
gcaatgctgagactgggcatgaccaaccccccttacattttagagcatctggaggaaatg
gcaaaaattttaaaccatccccgggtgtatgcgtttcttcacatcccagtgcagtctgct
tcagacagcgtccttatggacatgaagagagaatactgcgttgcagacttcaaaagagtg
gtggatttcttgaaagcgagagtgcccggaattacaatcgctacggacatcatctgtggc
tttcctggagaaacagatgaagattttaaggagacgttaaaactagttgaggagtacaga
ttccctagtctcttcattaatcagttttacccacgtccagggaccccagctgctaaaatg
gtgcaggttccagctcatgtgaagaaacaacgaacgaaggaactgtcccaactgtttcat
tcatacaacccttatgaccacaagattggtcagaggcaacaagttttagtaacggaggaa
tcttttgaccttcaatactatgtggcccacaatcgatactatgaacaggtccttgtcccg
aaggaacaaacattcatggggaaaatggttgaagtagaaatttttgaagcaggaaaacat
tatatgaaaggacatccattgtcagattccaaggtgtatactccatccatcgcacaacca
ttagaaaaaggaaaagtttctggcctgtctgaggagtgcaagtcattgctgaacaatggt
tccagttcaagagggaagccccctgatgagcgcagcgaggccttcctacaaacgtcttgg
ggaaagaaagaagagcagatgaagattgtctactttcttgttgctgtcttcgctgtccta
attgcttttctaggggcaaagttgtatcaaattgaaattttaggaaattaa
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