Bufo bufo (common toad): 121001752
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Entry
121001752 CDS
T07950
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121001752 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
121001752 (RBM22)
Spliceosome [BR:
bbuf03041
]
Complex B
Other components
Prp19-related factors
121001752 (RBM22)
Complex C
121001752 (RBM22)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RRM_3
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
121001752
NCBI-ProteinID:
XP_040288884
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All DBs
Position
5:complement(374798125..374814078)
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AA seq
416 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEFGLPIQVRDTGISFKDDMPRSDVNKEFYTQN
MEREIMNSDGTRPVGGLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTISTLYVGGLG
DNISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRPSAEMAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEREREGINDSGLTLEPVPGLPGALPPPPTEEESSANYFNLPPNGSSALV
NIALPPPGLTAPPPGFGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHTGKPSSA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgctgggatcaaatacttataaccgacagaactgggaagacgcggacttt
ccaattctttgtcagacatgtctaggagagaatccctatatcaggatgaccaaagaaaaa
tatggcaaagaatgcaagatatgtgctcgtcccttcacggtattccgatggtgcccaggg
gtgcgaatgcggttcaagaaaacagaagtatgtcagacttgtagcaagttgaaaaatgtg
tgccagacctgccttctagacctggagtttgggcttccgattcaagtgcgtgatacaggg
atttcctttaaagatgatatgcctagatctgatgtaaataaagaattctacacacagaac
atggagcgagaaatcatgaattctgatggaacaaggccagtcggaggtctgggaaaagcc
ccatccagcagcgatatgcttttaaaattggctcgtaccactccatactacaaacggaac
cgtccccacatctgctctttctgggtgaaaggagagtgtaaaagaggagaagaatgccca
tacagacacgagaaacccacagatcctgatgaccctcttgctgatcagaatatcaaggac
cgttactatggcatcaatgacccagtagcagacaaactcttgaaaagggcctcaacaatg
ccacgtttggaccccccagaagacaagaccattagtaccctgtatgtgggagggctgggc
gacaacatcagcgaatcggagcttaggaatcacttttaccagtttggtgaaataaggact
attacggtagtccagcgtcagcagtgcgcctttattcagtttgccaccagaccatcagca
gagatggcggcagagaaatcgtttaataaactgatcgttaatggtcgtcggctgaatgtc
aagtggggaagatctcaggcagctaggggcaaagaaagagagcgcgaaggcattaatgat
tctgggttgacgctagaaccggttcctggattacctggagctttgccacctccacctaca
gaagaagagtcctcggctaactattttaaccttcctccaaatggatcatctgctttggtt
aacattgcgctgccaccacctgggttaactgctccacctccaggatttggcccacacatg
tttcctcctatggcccctccaccgttcctccgtgctcctggtcacattcattacccttca
caagatccccagcgcatgggggcacatacaggcaagcctagcagtgcctag
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