Bufo bufo (common toad): 121001804
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Entry
121001804 CDS
T07950
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121001804 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
121001804 (NHLRC1)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121001804 (NHLRC1)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121001804 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
SdiA-regulated
zf-C3HC4_4
Baculo_IE-1
zf-C3HC4_2
HNHc_6
Motif
Other DBs
NCBI-GeneID:
121001804
NCBI-ProteinID:
XP_040288951
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All DBs
Position
5:complement(391029979..391031508)
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AA seq
399 aa
AA seq
DB search
MSSPAQKEIRTMKDFLEETEMHLLECKVCFEKYRQQQRRRPKNLPCGHTMCQDCVSSLCR
PGNERLECPFCRKACRKQDTSVCLPILHLLEILGRVVPDQPEASSADCARSQVTKLKSAS
FNLSVSFGGWGVLFNPSGIAFCTKTKCLVVSHDGKKRIARFTMNGKCLQQTGAKEDSDNA
IIYPADVAMTFDGFIIVTDTGDHSLKVFSQSGMCKLVVKRPFSLPWGLGINSKNEVLVSD
PDNGNLVLLAVDFDNGNIQKCIDICSHLSHPREMAVCPRSGEVIVVEHLAKNSKNSYSTC
LKLFSSQMKLMRQIDSFSLSLLLPLAVHTSGVAFDRSGNILLADINNRCVICLHRMEGFN
TIKHIVASGLSYPVALAVLEDGSVAVLDSGNHSVLIYSP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccggctcagaaagaaatcaggactatgaaggatttcttggaggaaactgaa
atgcatttacttgaatgcaaggtctgctttgaaaagtacagacagcagcagagacgcagg
cccaaaaaccttccctgtggccatactatgtgtcaagactgcgtctcctctctctgccgt
cctggaaatgaaaggctagagtgcccattctgccgcaaagcctgtcgaaagcaggatact
agtgtgtgtctccctattctacaccttttagagatcttaggacgggttgttccagatcag
cctgaagcttcttctgcagactgcgcaagaagtcaagtgacaaaacttaaatctgcaagt
ttcaaccttagcgtgtcgtttggtggttggggtgtactttttaatccaagtggcattgct
ttctgtaccaaaaccaaatgcttggtcgtgtcacatgatggaaagaaaagaattgccaga
ttcacaatgaatgggaagtgcttgcaacaaactggggcaaaagaggattctgacaatgcc
attatttacccagctgatgtagcaatgacctttgatggtttcataattgtgacagacaca
ggggatcattcccttaaggtgttcagtcaatctgggatgtgtaagttggtggttaagcgg
ccgttcagcttgccctggggcctgggcatcaactctaaaaatgaagtcctggtatctgat
cctgacaatggaaatcttgttctcttagctgtagactttgacaatggaaacatccaaaaa
tgtatagacatttgttcccatttgagccatcccagagagatggctgtgtgcccaagaagc
ggagaggttatcgtggtagagcacctagccaagaacagcaaaaactcttacagtacttgc
ttgaaactttttagtagtcagatgaaactcatgaggcaaattgatagtttcagcttgagc
ttgcttctacctttagccgtccatacttctggggtggcatttgaccggtccggtaatatt
ttgctagcagacatcaataatagatgtgtcatttgccttcacagaatggaagggtttaat
accataaagcatattgttgccagtggcctatcgtacccggtggcattggccgtgttagaa
gacggttctgttgctgtgttagacagtggtaatcactccgttctaatttattctccataa
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integrated database retrieval system
