Bufo bufo (common toad): 121002052
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Entry
121002052 CDS
T07950
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbuf04040
]
121002052 (TRPA1)
Ion channels [BR:
bbuf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121002052 (TRPA1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
121002052
NCBI-ProteinID:
XP_040289288
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Position
5:109993427..110191083
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AA seq
1124 aa
AA seq
DB search
MRKSIRRMFHPPGEKDSDPYDGVILNSDSSTSIQEDPQHIFKLIQEGHVCGIRSFILKNP
LSLMARDDNEATPLHYASKLAQLELMLMIINETSDEALNAVDNKGSTPLHWSVQKNQLDS
VKILLSRGADPNILNYYRMSPLHQAIYLHYNSIVEALLDSSTTNVNLEGDLGNTPIMQAC
YKDNSEALVMLFNRDAKLCKRNKIGCFPIHMTTFAGSLKCMDLVLKKGEEFGFSIEDHIN
FTDNEKSSPLHVAVQNGRLEVVKACVGYGAKVDLKQVIDNATPLHFAASQGATEIVKFMV
SSYSGEKNLLDLPDGNNETPLHKSCLFDHVDLAEYLLSMGANIDSVDNEMRTPLLMATSC
SSWKIVNLLLDKEADVKLTDNFGRNFLHLTVLQPGGLKNIREEFLQRADVKNLVSDEDTD
GCTPLHYACRHGVPNSVNNLLGLNVSLYSKTKNKRSALHFAALYGRYNTCDRLLRFVPDA
TLLNDADEKGMTPLHLAAENGHDRIVFLLLKRGALLLSDYRGWTGLHCAAFGGYTRTIKV
LLDTSIALIDKADKEKNTPLHLAAREGHSKAVGLLLESGAAVTLNVLEASFIHEAIRGGR
KDVVLMAIQSDRWEEVLVTFSHKSSFQCPILEMVNHLPEGFKHLLDRCMIEAPGDKKNWD
YYVEYNFRYLQCPLSFKKKKAQATPESKVLYEPLTTLNAMVQHNRVELLSHPVCKEYLLM
KWRAYGFKAHLLNLAIYSLGLIPLTLLIVNARAPNGNNSTAEVKPLRLEDTYFIRTCLGI
VMLMSMFGIVKEIVQIFQQKLKYLLDSSNVIDWTIHITSILFASSLCTNPLYEPSWKWQC
AAGAVFTSWVNFLIYLQRFESCGIYIVMFWEILRTLVRIIVIFFFLILGFALSFYVLLTP
QIAFKTPVLSLMQTFTMMLGDINYHDSFLEPFLHDQIEIPILTFLHLIIFTLLIPILLMN
LLIGLAVGDIAEVQRNAALKRIAMQVNLHTNLEKKLPFWFLKRVDQVFSIVYPNQPRIWG
VAIKSNMFRYFLACEDFSVEAPNNDAPMEVELWKQKNRLKDLSTIMQKQHELIKLIIEKM
EIVSEADDEDQQDFFKNNKPKKQKMERKESKWDCVMKAVKCKSA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatctatcaggagaatgttccatcccccaggggagaaggacagtgacccatat
gatggggtcatcctgaactctgactccagcacctccattcaggaagacccacagcatata
tttaagctaattcaagaaggccacgtttgcggcatccggagtttcatattgaagaatcct
ctaagtctgatggctagagatgataatgaggccacaccacttcattatgcttcaaaactt
gcccagttggagctgatgttaatgatcatcaatgagacttctgatgaagcccttaatgcc
gtggataataaaggcagcacacctctacattggtctgttcagaagaaccaactggacagc
gtgaaaatacttctgagccgaggagctgacccaaacatactgaactactaccggatgtct
cctcttcaccaggccatttacttgcattataacagtattgtagaggcattacttgatagc
agtactaccaatgttaacctggaaggtgaccttgggaatactccgattatgcaagcttgc
tataaggataattcggaagccttagtaatgctgtttaatcgtgatgcaaagctgtgtaaa
agaaacaagatcggatgctttccaatacacatgactacatttgcagggtctttaaagtgc
atggatctggttctaaaaaaaggtgaagaattcggatttagcattgaggatcacatcaat
ttcacagataatgaaaaaagcagtccactccatgtggcagtacaaaatgggcgtttggaa
gttgtgaaagcatgcgtaggatatggcgcaaaagtagacctcaaacaggtaattgataat
gccaccccgctccattttgctgcttcacaaggagcaactgaaatcgtgaaatttatggtg
tcatcatactccggtgaaaagaaccttttggatctgccagatggaaataacgaaactcca
cttcataaatcgtgcctatttgatcatgtggacctggcagagtatttattatcaatggga
gcaaatattgacagtgtggataacgagatgcgcacgcctcttctgatggctacttcttgt
tcttcttggaagattgtaaatttacttcttgacaaagaagctgatgtaaagctgacggat
aattttggaaggaattttcttcatctgacagtattgcagccaggagggttaaagaacatc
agagaggaatttctacagagggcagacgtaaagaatctcgtgagtgatgaagacacagat
ggttgcactccactacattatgcctgccgccatggtgttccaaactctgtgaacaatctt
cttggacttaatgtgtctctgtattccaaaaccaagaataaaagatcagctctgcacttt
gctgctttatatggtcgttacaacacatgtgaccggctcttaagatttgtgcccgatgct
acgcttctcaatgatgcagatgaaaagggaatgacacctctgcatttagctgctgaaaat
ggacatgacagaatagtttttcttttactcaagaggggagctcttcttttaagtgattat
cgtggatggacaggcttgcactgtgcagcctttggaggttacactcgtaccatcaaggtt
cttctggatacatctattgcacttattgataaagcagataaagaaaagaacacacctctt
catctagccgctcgtgagggacactccaaagctgttggtcttctgctggaaagtggagca
gcagtaactttaaatgtacttgaggcttcttttattcatgaggcaatacgtggaggaaga
aaggatgtggtcttgatggcaattcagagtgataggtgggaagaagtgctcgtcacattt
tcacacaaatctagttttcaatgtcccattctggaaatggtaaatcatctcccagagggc
ttcaagcatctgttggatagatgtatgattgaagcaccaggagacaagaagaactgggat
tattatgttgagtacaacttccgttatctgcaatgtcctctatcctttaagaaaaaaaaa
gcacaagcaacacctgaaagcaaagtcttatatgagccccttactacattaaatgctatg
gtacaacacaaccgtgtggagctcttgtcacatccagtctgtaaagaatatctgctcatg
aaatggagagcatatggctttaaagctcatcttttaaacctggctatttactcactggga
cttattcctcttacacttctgatagtaaatgctagggcacccaacggtaacaattcaact
gcagaagttaaacctttacgacttgaggacacatatttcatacgcacctgcttgggcatt
gtaatgctcatgagtatgtttggaattgtaaaagaaattgttcagatctttcaacagaaa
ctcaagtatctacttgacagcagtaatgttatagactggacaatccatattaccagcatc
ctttttgcatcatctctctgtacaaatccattatacgagcctagttggaaatggcaatgt
gctgcaggagctgtgtttacttcatgggtcaactttttgatttatcttcaaagatttgaa
tcgtgtggtatatatatagtaatgttttgggagatcctgagaacactcgtgcgaattata
gtcatcttctttttcctgattttgggatttgcattaagtttctacgtactactcactcca
cagattgcattcaagacccctgtcctttccctcatgcagacctttaccatgatgcttggt
gatattaactatcatgatagctttcttgaaccatttcttcatgatcagattgaaataccc
attttaacgtttctccatctgattatattcactttgctaatcccaattcttctgatgaat
ttacttattggtctggctgtcggtgacattgcagaagtacagcggaatgcagctcttaaa
aggattgcaatgcaggtgaatcttcatacaaatttagagaagaaactgccattctggttc
ttgaagagggtggatcaagtcttttctattgtttaccccaatcaaccaagaatttggggt
gttgctatcaaatcaaatatgtttcgctatttccttgcttgtgaagactttagcgttgaa
gctcccaacaatgatgctccaatggaagtggaactttggaagcagaaaaataggttgaag
gatctgtccacaataatgcagaagcaacatgaacttatcaagctaatcattgagaaaatg
gagattgtatcagaggcagatgatgaagaccaacaggacttctttaaaaataataaaccg
aagaaacagaagatggaacgcaaagaaagcaaatgggattgtgtgatgaaagctgtaaaa
tgtaaaagtgcctag
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