Bufo bufo (common toad): 121002087
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Entry
121002087 CDS
T07950
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121002087 (TRIM71)
04121 Ubiquitin system [BR:
bbuf04121
]
121002087 (TRIM71)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121002087 (TRIM71)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121002087 (TRIM71)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121002087 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
TEN_NHL
zf-C3HC4
ANCHR-like_BBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
Vgb_lyase
ATP-synt_B
DUF4094
Motif
Other DBs
NCBI-GeneID:
121002087
NCBI-ProteinID:
XP_040289324
LinkDB
All DBs
Position
5:complement(425496032..425571652)
Genome browser
AA seq
848 aa
AA seq
DB search
MPMASFPESDFQLCPLCKEMCVSSAPVSLSSSSSSQASSSSSSSGSLGTAPRRLHVLPCL
HAFCRQCLEGHRSPGDSLQLHCPVCDHKVLMSEAGMDALPSSTFLHLSNLLDAVVGAAEE
PQSNGSRGGCGGARRHQPRPRSASCSSSSLLRRAPPRQPEPRCSSCDEGNGASSHCLDCQ
ENLCDNCLRAHQRVRLTKDHFIERFAGSRAPGCISGTASPCNSAASSAATTSSSSTSSPF
QGSAFSILPVYPERLAYCQQHDEEVLHFYCDTCSTPICRECTMGRHAGHGFVYLQDALQD
SRALTIQLLADAKQGRQAIQLTLEQAQALAEQVEMKAKVAQSEIKAVTSRHKKALEEREC
ELLWKVEKIRQVKAKSLYHQVDKLHQALNKLDSTINAVQQVLEEGCTMDILIARDRVLAQ
VQDIKNARGLLQLQEDDRIMFTPPDQALYLAITSMGLVSSGAFAALTKATGEGLKRALQG
KVASFTVIGYDHDGEARLSGGDLITVLVMGPDGNLFAAEVTDQMNGTYLVSYRPQLEGEH
LISVMVCNQHIENSPFKVNVKSGRCYLGIGLPSLSFGGEGDTDGKLCRPWGVCVDREGYI
IVADRSNNRIQIFKPCGTFHHKFGSLGSRPGQFDRPAGVACDSSRRIVVADKDNHRVQVF
TFEGQFFLKFGEKGTKNGQFNYPWDVAINSEGKILVSDTRNHRVQLFGPDGTFLNKYGFE
GALWKHFDSPRGVAFSQDGYLVVTDFNNHRLLIIKPDCQSAHFLGTEGTGNGQFLRPQGV
AVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFGQIDRPSGIAVTPDGTIVVVDF
GNNRILAF
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggcttcattcccggagtccgacttccagctgtgcccgctgtgtaaggagatg
tgtgtgtcgtctgcgcccgtctccttgtccagctcgtcctcctcacaagcgtccagcagc
agcagcagcagtggcagcctgggcaccgctccccgcaggctgcacgtcttgccctgtctc
catgcgttctgcaggcagtgcctagaggggcaccggagccccggggactctctgcagctg
cactgccccgtgtgcgaccacaaagtgctgatgtccgaggccggcatggacgctctgccc
tcctccaccttcctgcacctcagcaacctgctggacgcggtggtgggagccgccgaggag
ccgcagagcaacggaagccgtggaggctgcggcggagcccggagacatcagccgcgtccg
cgctccgcgtcctgttcctcctccagcctcctgcgccgggcgccccccagacagccggag
ccccgctgctcgtcctgcgacgagggcaacggtgccagctctcactgcctggactgccag
gagaacctgtgcgacaactgcctgcgggcacaccagagggtgcgcctcaccaaggaccac
ttcatcgagaggttcgcagggagccgggcgcctggctgcatcagcggcactgcctccccc
tgcaactctgctgcatccagcgctgccactacctcatcctcgtctacctcttcacccttc
cagggcagtgccttctccattctgcccgtctacccagagaggctagcctactgccagcag
catgatgaggaggtcttgcatttctactgtgatacttgctctacgccgatctgtcgtgag
tgcactatgggacgtcacgctgggcacggctttgtctatcttcaagatgctcttcaggac
tcaagggcgcttactatccagctgttggctgatgctaaacaaggtcgccaagctattcag
ctcactcttgagcaggcccaagcactggcagagcaagttgagatgaaagccaaagtagcg
caatcagagatcaaagcagtcacttcccgacacaagaaggcactggaggagagggaatgt
gagctcctgtggaaggttgaaaaaattcgtcaggtgaaagccaagtctctctaccatcag
gttgacaaactccaccaggctcttaataaattggacagcacaatcaatgcagttcagcag
gttttagaagaaggttgtacaatggatattctcatagctcgggaccgtgtcttagcccag
gtgcaagatataaaaaatgctagaggcttgttacagcttcaagaggatgaccgaattatg
tttactccccctgatcaggccctttatcttgccattacatctatgggtctagtaagtagt
ggagcatttgcagctctaacaaaagccacaggagaaggattgaaacgggcccttcaaggc
aaagtagcttctttcacagtaattggttatgaccatgatggcgaagcacgtttgtcagga
ggtgatctcataactgttctagtgatgggtcctgatggaaatctgtttgcggctgaggtc
actgatcagatgaatgggacctatttggttagttatagacctcagcttgaaggagaacac
cttatttcagtgatggtgtgtaatcaacatattgagaacagtccttttaaagtgaatgtg
aaatctggtcgatgctatttaggtattggtctcccttcactttcttttggaggagaaggg
gacactgatggaaagctttgtcgtccatggggtgtctgtgtggaccgagaaggatatatt
attgtggctgatagaagcaataaccgaattcaaattttcaaaccatgtggcacatttcat
cacaagtttggcagcttaggttcgagacctggccagtttgatcgccctgctggtgtcgct
tgtgacagttcccgtaggattgtagtagccgataaggacaaccatcgtgttcaagtcttc
acctttgagggacaattctttttgaaatttggggagaaggggaccaagaatgggcaattt
aactatccttgggatgttgccattaattcagaagggaagattctagtgtctgatactcga
aaccatcgtgttcagttatttggtccagatggaacattcctaaataagtatggttttgaa
ggtgctctctggaagcactttgactccccacgtggagtggcattcagtcaagatggctat
cttgtggtgactgacttcaacaaccaccgactgctgataatcaagccggactgccagtca
gcacatttcttgggcacagagggtacaggaaatgggcagttcctgcgaccacagggtgta
gcagttgatcaagaaggacgcattattgtggcagactccagaaaccacagagtacaaatt
tttgagccaaatggcagcttcttgtgtaagtttggcactcaaggaagtggctttggtcag
atagatcgtccatctggcatagctgtcactcctgatggcacaattgttgtggtggacttt
ggtaacaaccgaattctagccttctaa
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