Bufo bufo (common toad): 121002236
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Entry
121002236 CDS
T07950
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121002236 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121002236 (EXOSC7)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121002236 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
121002236 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
121002236
NCBI-ProteinID:
XP_040289538
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All DBs
Position
5:complement(217889417..217931086)
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AA seq
291 aa
AA seq
DB search
MASVILSEAEKVYILHGIQDDLRTDGRGCEDYRGIEVETDVVSNTTGSARVKIGHTDVLV
GVKAEMGTPKLDHPKKGCLEFFVDCSANATPEFEGRGGEELGTEIAHMLYKIFDNQSSID
LESLCILPGEHCWVLYVDVLLLECGGNLFDTISIAVKAALFNTRIPKVRVLEDDEGSKDI
ELSDDPYDCVRLNVEHVPCIVTLSRIGHRHVVDATLQEEACSLASLLISVTSKGTLTCMK
KIGKGSLDPESIFEMIETGKRVAKFLHLSLQSVLNQEESLGKNRQKIGFLR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgatcctgagcgaagccgagaaggtgtacattctgcacgggattcaggat
gatctgcggacagacggcagagggtgtgaggactaccgagggatcgaagtggagaccgat
gttgtatcaaatactactggatctgcacgtgtgaaaattggccacaccgatgtcctagtg
ggagtgaaagcagaaatgggaaccccgaagttggatcaccctaagaaaggctgcctggag
ttcttcgtagactgttctgctaatgccactccagagtttgaaggacgtggaggagaagag
cttggcacggagatcgcccacatgctttataaaatatttgataaccagagcagcattgac
ctggagtcgctctgcattctgcccggcgagcactgctgggtcctttatgtggatgtgctg
ctgttggagtgtggaggaaacctgtttgacaccatttctatagcagtaaaggcagcgctc
ttcaatacaaggatacctaaagtacgtgtactggaagatgatgagggatccaaagacatt
gaactttctgatgatccttatgactgcgtgcggctgaatgtagagcatgtcccctgtatt
gtcacactaagccgaattggtcaccgacatgtagtagatgccacattgcaagaagaagcc
tgttctttggcaagtcttcttatctctgtgacaagcaagggtactttgacttgtatgaaa
aaaataggcaagggaagtctggatccagaaagcatcttcgaaatgattgagacggggaag
cgagttgcaaagttcttacacttgtccttacagagtgtattaaaccaagaagaaagccta
gggaagaacaggcaaaagattggcttcctacggtga
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integrated database retrieval system
