Bufo bufo (common toad): 121002287
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Entry
121002287 CDS
T07950
Symbol
SNX13
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-13
KO
K17925
sorting nexin-13
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbuf04990
]
121002287 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
bbuf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121002287 (SNX13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
121002287
NCBI-ProteinID:
XP_040289616
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All DBs
Position
5:complement(454231198..454388768)
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AA seq
967 aa
AA seq
DB search
MTPKASLSIWGWGSLGGVLFLITFGPFAIFYFAFYILCFVGGGFVVSLLFGKITSEKYLE
RCEHSFLPPTSAGISRVLEEMKREARPIKIDRRVTGANMIDEPLQQVIQYSLRDYIHYXY
YTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQQRMA
EKEDQKKDSSEDFVETFFEVEVEMEKDSCRDLICTSSKDEEGFLKDLCEVLLYLLLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYIIWMIHDSNCNYEAFMNVIKLCDHI
GELEAVRDKAAEELQYLRSLDTVGDDINTIKNQINSLLFVKKVCGTRIQRVQSGKEIDTV
KLAANFGKLCTVPLDKILVHNVALQFFMDFMQQTGGQAHLFFWLTVEGYRVTAQQQLEVL
QSRQRDGKHQINPTKGLLKQAAVGVFDQYLSEKASPRVQIDDYLLAKLEEVVKNEDPTPE
IFDEVQKKVYDIMLRDEHFYPAFRHNALYIRMLAELDMLKEPSFKGSDDGDGESFNGSPT
GSINLSLDDLSNVTAEEPIQIHAFISDTVHVDCDPYAVAGVCNEHGKTYALYAITVKKRD
GIQEIWKTYRRYSDFHDFHMRITEQFENLASLLRLPGKKTFNNMDKEFLEKRKNDLNAYL
QLLLSPELLKACPALAHCVFDFLENKAYNKGKGDFARKMDTFVNPLRNSMRNVSNAVKSI
PDSLAEGMNKMSDNMGKMSERLGQDIKQSFTKPPMLVPKPDSDPEHCRVSAQLDDNVDDN
IPLRVMLLLMDEVFDLKERNQWLRRQITSLLQQLIRATYGDTINRKIVDHVESMTSPDQV
ADYVKHFRDSFWPNGILAETAPRRDRSIRMRTRVSAKTKLLEIMPDELKHIIGAETTRKG
ILRVFEMFQHTQLNRRLAYVFLEGFLETLFSQCKFHELFNKLHSRSERMRRYRERHQSYH
APALQKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaaaggccagtctttccatatggggttggggaagtctcggtggcgtgctcttc
ctcataacatttggaccctttgctatattttacttcgccttttacatcctctgcttcgtg
ggtgggggttttgtggtctcacttcttttcggaaagataacctctgagaagtaccttgag
agatgtgagcattcgtttcttcctccaacttctgctggaatctcgagggtcttagaagaa
atgaagcgtgaagctagacccatcaaaattgacagaagggtgaccggtgccaatatgatt
gatgaacccctgcaacaagtcatacagtattccttaagagactatattcattacntgtat
tacacactaagcgaggacgaatcatttctccttgaaataaggcagactgttcagaatgca
ctcgttcaattttccacccggtctaaagaagttgactggcagccttattttaccacccgg
ttagtagatgactttgccactcacctccgagtgttcagaaaagctcagcagaggatggca
gagaaagaagatcaaaagaaagattcctctgaagattttgtagaaactttttttgaggtt
gaagttgaaatggagaaagattcctgtcgtgacctcatatgcacttcttctaaagatgag
gaaggcttcctgaaggatttatgtgaagttttactgtatttattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtgagggaaatcctttcacgaggaattcttctt
cctttaataaaccagctcagtgatcctgattatattaatcaatatatcatttggatgatt
catgattccaattgcaattatgaggccttcatgaatgtcattaagttatgtgaccatatt
ggagagttggaagctgtgagggacaaagctgctgaagaattacagtatctccgttcttta
gataccgtgggagatgacatcaacactataaaaaaccagataaacagtttactgtttgta
aagaaagtatgtggaacgcgaatacagagagtgcagtctgggaaagaaattgatactgtg
aagttggctgcaaactttggaaaactttgcacagtcccgctggacaaaattcttgtacac
aatgttgcactacagttttttatggattttatgcagcagactggggggcaagcacatctc
ttcttctggcttacagtggaggggtaccgggtgactgcacagcagcagctggaggtgctt
cagagccggcaacgtgacggaaagcaccaaatcaatccaacaaaggggctgttaaaacaa
gctgcggttggcgtgtttgaccagtacttatcagaaaaggcatcaccaagagttcaaatc
gatgattatttgctagcaaagcttgaagaagtggtgaagaatgaagacccaacgcctgag
atctttgatgaggtccaaaaaaaggtttatgacatcatgttgcgggatgaacacttttat
cccgcgtttcgccacaacgctctctacatacgaatgcttgcagagttggacatgttaaaa
gagccaagctttaaaggatctgacgatggagatggagagtcttttaatggatcgccgacg
ggcagcatcaatttgtctctggatgacctgtccaacgtcaccgctgaagagccaatacaa
atccatgcttttatatctgacactgttcatgttgactgtgacccatatgctgtggcagga
gtatgtaatgaacatgggaaaacctatgcactgtacgccatcactgtcaagaagcgagat
ggcattcaggaaatatggaaaacctatcggcgttacagtgacttccatgatttccacatg
cggatcactgaacagtttgaaaaccttgccagtctcctcaggctgccaggaaaaaagact
ttcaacaacatggataaagaatttttggagaagagaaaaaatgatttgaatgcgtactta
cagttgttactaagtcctgagttgctgaaggcctgtcctgcactggcccattgtgtattc
gactttcttgagaacaaagcctacaataaagggaaaggggactttgcacgtaagatggac
acatttgtaaatccactgcgcaattcaatgaggaatgtctccaatgccgtgaaatccatt
ccagatagcttagctgaagggatgaataagatgtctgacaacatgggcaaaatgtctgaa
agactcggacaagatattaagcaatcttttactaagcctccaatgcttgtaccaaaacct
gattctgatcctgaacattgcagagtgtctgcgcaactagatgataatgttgatgacaat
atccctcttcgtgtgatgcttctgctcatggatgaagtctttgacctgaaggaaagaaat
cagtggttaagaagacaaatcaccagccttctccagcagctcattagagccacatatgga
gacacaattaatagaaaaatagttgatcatgtagagtccatgacatcacctgaccaagta
gctgattatgtcaagcatttcagagactcgttttggcctaatgggatattggcggagact
gcgcctcgcagagacagaagtatacgaatgcgtactagagtatctgcaaaaacaaagctg
ctggaaattatgccagatgaactgaagcacataattggggcagaaacaactagaaaggga
atccttcgggtctttgaaatgtttcagcacacccaactaaaccggagacttgcctatgtt
tttttagaaggatttctggaaaccttattttcacaatgcaaattccatgagctttttaac
aaactgcactccaggtcagagcgaatgaggaggtatagagagagacatcagtcttatcat
gcacccgccttacagaaaaggtga
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