Bufo bufo (common toad): 121002873
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Entry
121002873 CDS
T07950
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121002873 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbuf01009
]
121002873 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
121002873 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
bbuf03029
]
121002873 (RB1CC1)
Protein phosphatases and associated proteins [BR:
bbuf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121002873 (RB1CC1)
Membrane trafficking [BR:
bbuf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121002873 (RB1CC1)
Mitochondrial biogenesis [BR:
bbuf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121002873 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
121002873
NCBI-ProteinID:
XP_040290439
LinkDB
All DBs
Position
5:135017303..135157249
Genome browser
AA seq
1563 aa
AA seq
DB search
MKLYVFLVNTGITLTFDTELAVQTVTDLKHAIQSKYKISVQHQILVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPVIPRTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENAYSKYIQ
SVDDIKMKLTSLGTAVSVMAKIPLLECLTRHSYRMCLDRLMSSTDGEGDELEAEKTTDLV
QYDETKQRNPALLASLSTSGEHVSQDVHDNRTEQENPEFVDPMDEESPLFNVSLLDWINV
QDRPNDVESLVRKCFDSMSRLDPRIIQSFMAECRQNVAKLDNQNMKAIKGLEDRLYALDQ
MIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLTNHRKLLDIK
QKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALFRLLTELLERIKIVEALSTVPQ
MYCLAVVEVVRRKMFTKHYREWANALVKDGKSLYENEKAKRETFGKIFRKSYLRNRLFRG
LDSWPSSFCTRKPRRFDSELPDISLNDLQFLQTLCPPEVQLFLRVPLLCDFEPLHQHVRA
LHNLVKAAQSLDEMSQTITDLLNEQKASNGQLSPQSTTTPRIENATETTATTSSKSPPSL
SLQGPICPSVAIPGPLEELSPDSIDAHTFDFETIPHPNIEQAIKQGSLDLDSLADSPESD
FMSAVNEFVIEENLVSPNISDTQSPEMMVESLYSSVINAIDNRRMQDTKSKAKDDSVENA
SLKICLEKCKMVAQESQANLRNFKEELCHLRKHVQREQSEFANAVKTVSAEVLNMIERAK
VSLETALKAKHLEELQLLEESYEKQLHVSKQDREVNEETMAKLKHDIAALNEDLQSKDNE
FAAIRRENETFLCLQSEKDEKVIRLESAMREQTCEIQMLKQSREAALEDFKKLHAENEEK
LRLLKEEFAILEQTHLKELEENLKLQHAQELEGIKAEHKCGLGKLKNDTKLTIDQLRESS
TASAQEKESQLQELNCRLSELSTVRCKLEVELAIKEGEIDEMKLILKESKMQQQDDLKCQ
LDEKTETLKKEIEKLNSLIQIQKEEHELGLGQLKTLLTAEKNLCISEILERHGAEASSLQ
RDICHLTSVHQKALETESRLQEEISVLRRQLDSSLKALEDHERSLKEQKDSYESSIRKLE
EERDQIFSAQKLERESPAQKCASDKEECARPALKDFDINRQSAEKELLEKIQLLEQELSK
SSSGFAHSLVCELQEKLQQEKQLISEQIDQLDREKTEELQNLRISLIAEQQTNFNTVLTR
ERLKKENIISELNEKLKSVTQQQERDKDLIETLSEDRASLLEEKKRIDDELSKLRSFVSS
AHTVPASEPSGAFVPEPPSEDEDRMEHALEISMTAVHDITLSEEKQKIILLERTLQQKEE
ENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLH
SESLSALDLKPGECASGSSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWN
KKV
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgtttctggtcaacacgggaatcacccttacttttgacaccgagctt
gcagttcaaacggtgactgaccttaaacatgctattcagtctaagtacaagatctctgtt
cagcaccagatacttgtcgtaaatggaggagaatgtatggcacctgacagaagggtgtgc
agttacagcgctggtactgacaccaatccaatattcctcttcaataaagagatgatatta
tgtgaacggcctccggtcatcccgaggacaacattttctgccgagaatgaaatggaatta
aaagttgaggagtcccttatgatgcctgctgtttttcacactgtcgcctctaggacacag
ctcgcagtggaaatgtatgaggtagccaagaagctttgttccttttgtgaaggtctggta
catgacgagcatctgcagcatcagggctgggctgctattatggccaacctagaagattgt
acgcattcataccaaaagctgcttttcaagtttgaaaatgcctactcaaaatatatacag
tctgtagatgatataaagatgaagttaaccagtttaggaaccgctgtttctgtcatggcc
aagatcccgctgctagagtgtctaactcgacatagctataggatgtgtttagataggttg
atgtcttctacggatggagaaggtgatgaactggaagctgagaagacaactgacttggtg
caatatgatgaaacaaaacagagaaatccggctttattagcgtctctgtctacatcggga
gaacatgtgtcgcaggatgtacatgacaatcgtacagagcaagagaacccagagtttgtg
gaccctatggacgaggaaagcccactcttcaatgtgtcactgctggactggataaatgta
caggatcggcccaatgatgtcgagtcgttggtcaggaaatgttttgactctatgagcaga
ctggatccacgaataattcaatcattcatggctgagtgcagacaaaatgttgccaaattg
gataatcagaatatgaaagccatcaaggggcttgaagatagactttatgcactggatcaa
atgattgctagctgcagtaggttggttaatgaacaaaaagaacttgctcagggattttta
gccaatcagaagcgggctgaaaacttgaaggacccctctgtgttacctgatctgtgtttg
agccatgcaaatcaactaatgatcatgttaacaaaccacagaaagctgttggatatcaaa
cagaaatgtaccactgccaaacaggagcttgccaataatttacaagttcgattaaagtgg
tgctgcttcgtaatgctgcatgctgatcaagatggggagaagctccaggctttattcaga
cttttaacagagttactcgaaaggatcaaaatagtggaggcacttagcacagttcctcaa
atgtattgcttagcagtagttgaagttgtaagaagaaagatgttcacaaaacactacaga
gagtgggcaaatgccttagtaaaagatggaaaatctctttatgaaaatgagaaggcaaaa
agggaaacttttgggaaaatatttaggaaatcctatttacgaaatcgtctctttagagga
ctcgactcttggccttcatctttctgtacacgaaagccacgaaggttcgatagtgagctt
cctgatatctctttaaacgacctgcagttcttacagacgctctgtcctccagaagtccaa
cttttcctcagggtgcccttactttgtgattttgagcctctacaccagcatgtacgtgct
cttcataacctggtaaaagctgcacaaagtttggatgaaatgtcacagaccattacagat
cttctgaatgaacaaaaggcttctaatggccagctttccccccagtctacaacgacacca
aggattgaaaatgcaaccgaaactacagctactacctcatccaagtctcctccatcactc
agtcttcagggtcccatttgtccttctgttgccattccaggacctttagaagaactgtct
ccagacagcattgacgctcatacatttgactttgaaacaattccccatccaaatattgaa
caggctattaaacagggttctttggatttggactcattagcagatagtccagaatcagat
tttatgtctgccgtcaatgagtttgttatagaggagaatcttgtctctcccaatattagc
gatacacagagtccagaaatgatggtggagtccctgtattcctctgttataaatgcaata
gacaacagacgtatgcaggatacaaaaagtaaagcaaaagatgacagtgttgaaaatgct
tctttaaaaatttgtctggagaaatgtaaaatggttgcccaggaatcacaagctaacttg
aggaatttcaaggaagagctttgccatttgaggaagcatgtacaaagagagcagagtgaa
tttgcaaatgctgttaagactgtttctgctgaagttctcaatatgattgaacgcgccaag
gtttctcttgaaaccgccttaaaagcaaaacatttggaggaattgcagcttttggaggaa
tcatatgagaagcaacttcacgtatcaaaacaagatcgtgaagtaaatgaggaaaccatg
gccaagttgaaacatgacattgctgccctaaacgaggatttgcagagtaaggataatgaa
tttgctgcaatcagaagggaaaatgaaaccttcctttgtttacagagtgaaaaggatgaa
aaagttatccgccttgaaagtgccatgagggagcagacgtgtgaaattcagatgctgaaa
cagtctcgagaagcggcgcttgaggattttaagaagcttcatgccgagaatgaagaaaaa
ctccggctacttaaggaggagttcgcgattttggaacaaacacatttgaaagagttggaa
gaaaatttaaagctccagcatgcacaagaactcgaaggtataaaagcagaacataaatgt
gggttaggaaagttaaagaatgatactaagctcacgattgaccaattgcgagagtcttcg
acagcctcggctcaggagaaggaatctcagctgcaagaattaaattgtagactttccgaa
ctgtccacagttcgatgtaaattggaggttgagttagcaattaaagaaggagaaatcgac
gaaatgaagttaatcctgaaggaaagtaaaatgcaacaacaggatgacctaaaatgtcaa
cttgatgagaagacagaaaccctgaagaaagagattgaaaaactgaatagcttgatccaa
attcagaaagaggagcatgagctagggcttggccaacttaaaacactattgacagctgaa
aaaaatctgtgtatttcagagattttagaaaggcatggcgccgaagccagttcattgcaa
agagacatttgccatttaacgtctgtccatcaaaaagctctagaaacagagagcaggctc
caggaagagataagtgtcctacgtcgccaactggatagtagtttgaaagcacttgaagat
cacgagaggtctttgaaggagcagaaagacagttatgaatcatccattcggaaacttgag
gaagagcgagatcaaattttcagcgcacaaaagctagaaagagaatcgcctgcacagaag
tgtgcgtctgataaagaggaatgtgcgcgccctgcccttaaagactttgacataaacagg
caatctgctgaaaaagaacttttagaaaaaattcaactccttgagcaggagttaagcaag
agttcttctgggtttgcacatagtctggtttgtgagcttcaggaaaagcttcagcaggag
aaacagctaatttctgagcaaattgaccagctggatagggaaaaaacggaagaattgcag
aacctcaggatctcccttatagcagaacaacagacaaactttaacactgttttaacgaga
gagagacttaaaaaagaaaatataattagtgaactgaatgagaagctgaagagtgtcaca
cagcagcaggaaagagataaagatctaattgaaacactatctgaagaccgagcaagtttg
ctcgaggagaagaagagaattgatgatgaactcagcaagctaaggagttttgtgtcttca
gctcacacagttcctgcctctgagcctagtggagcttttgtgcctgaacctccttctgaa
gatgaagacaggatggagcacgctttagaaatcagcatgacagctgttcatgatattaca
ttgtcagaggagaaacaaaagattattctgctggagagaacattgcagcaaaaagaagag
gaaaataagcgactaaaccagagattgatgtcacagagcatgtcatccgtttcttcaagg
cattctgagaaaatagcaattcgagacttccaggttggggacttggttcttattatcttg
gatgagcgtcatgacaattatgtgctatttactgtcagcccaacgttgtatttcttgcat
tcagaatcactttcagcattagatcttaagccaggtgagtgtgcttctggttcctctaga
agaccctgggtacttggtaaagtgatggaaaaggaatattgccaagcaaaaaaggctcaa
aatcgatttaaggttcccctgggtacaaaattttatcgcgtgaaagcagtgccatggaac
aagaaggtttaa
DBGET
integrated database retrieval system
