Bufo bufo (common toad): 121003221
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Entry
121003221 CDS
T07950
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbuf03016
]
121003221 (TSEN34)
Enzymes [BR:
bbuf01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
121003221 (TSEN34)
Transfer RNA biogenesis [BR:
bbuf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
121003221 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF1840
Motif
Other DBs
NCBI-GeneID:
121003221
NCBI-ProteinID:
XP_040290822
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All DBs
Position
1:complement(214677754..214688608)
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AA seq
310 aa
AA seq
DB search
MERCRQEEGSVHGAAAAEHSRILIHLQQGRALVWRADHARRIREEHGLVGSLVGALVRKP
RQNTRLGLPLQLLPEEARLLVEIGAARLVHHRWAIDGTDVSAAVEDKESYAQFLHHSYEE
QGQLALQEKKRTLESLSGRIAEGRSKRKRQRVEQEEPMESSSQGPIKELINLEQTFHFPK
EAMMVQIPTAHLRPGNEEEVDVQQVSSEWPYTGQKNHEARYKVFRDLWQKGYHLTNGGKF
GGDFLVYPGDPMRFHAHYIAICFPQDENIALSDIITAGRLGTNVKKTVLLCSSSQEGQVI
YTSLQWSGLQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctgcaggcaggaagagggcagtgtgcatggcgcggccgcagcagaacattcc
aggatcctgatccatcttcagcagggaagagccttggtatggagagcagaccatgcccgc
aggatccgggaggagcacgggctggtgggaagcctggtaggagcgctggtgaggaagccg
agacagaacacccggctcggcctgccgctacaactgctccctgaagaagcccggctgctg
gtggaaatcggggcagcacgactggtacatcatcgctgggcgatcgatggcaccgatgtc
tccgccgctgtagaggacaaggagtcctatgcccagttcctgcaccacagctatgaagaa
caagggcagctggccctgcaagaaaagaagcggacgctggaaagcctgtcagggcggata
gcggaaggtagaagcaagaggaaaagacagcgggttgagcaagaagaaccaatggagtca
tcctctcaaggtcctataaaagagctgattaatctagaacagacattccacttcccaaag
gaagcaatgatggtgcagattcctaccgctcatcttcgacctggtaatgaagaagaggtg
gacgtacaacaggtgtcatctgagtggccatacacaggccagaagaatcatgaagcacgc
tacaaggttttcagggatctttggcagaagggataccacctcaccaatggtggcaagttt
gggggagattttcttgtttatccaggagatccaatgcgcttccatgcacattatatcgct
atctgctttccacaagatgaaaacattgcactcagtgacatcatcactgcaggacgcttg
ggcacgaatgttaaaaagacagttttgctgtgctcctccagccaagagggacaagtgatc
tacacatctttacagtggtcagggttgcagtga
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