Bufo bufo (common toad): 121003222
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Entry
121003222 CDS
T07950
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121003222 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
121003222 (DHX8)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121003222 (DHX8)
Spliceosome [BR:
bbuf03041
]
Complex C
Other components
Step II factors
121003222 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
AAA_16
T2SSE
ABC_tran
Flavi_DEAD
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121003222
NCBI-ProteinID:
XP_040290820
LinkDB
All DBs
Position
6:complement(321172341..321221757)
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AA seq
1193 aa
AA seq
DB search
MADLEELRKLEYLSLVSKVCTELDNHLGINDKDLAEFVIDLAEKFTTFDSFKSALEKNGA
EFTDSLISNLLRLIQTMRPPAKQSTSQEANLKPKSEKEKLKDLFPALCRPDNPRIRSMLD
PDDVKVAADVLEQLDALKPSMEGKAKEKSSRHKDKKKRSRSRSRERSRKHKHRSRSRSRE
RTKKSGRYRSRSRSPIKNRHRSPIKEEHTSKNHRSEKSDERWREKHVDRPPPEEPSIGDI
YNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFT
GCKTSLSMKDVDQDTGEDLNPNRRRNLVGENNEEASMRNPDRPNHLSLVNAPEVEDDTLE
RKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPP
FLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNK
HWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPI
YKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVA
KRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEA
HERTIHTDVLFGLLKKTVQKRADMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEIL
YTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL
IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS
KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS
TVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEP
MLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLA
VYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAI
CSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTT
IDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctggaagagctgaggaaacttgaatacctctccttggtttccaaggtttgc
acagagctggataaccatttggggatcaatgacaaagatttagctgagtttgtcatcgat
ctcgcagagaaattcactacttttgactcctttaaatcagctctagagaagaatggagcc
gaattcactgactctctaataagcaatctgttgcgcttgattcagaccatgaggccacca
gcaaagcagtcgacaagtcaagaagcaaatttaaaacccaagtctgaaaaggagaagctg
aaggatttattcccagcactttgcagaccagacaaccccagaattcggagcatgctggat
ccggatgatgtaaaggtggctgcagatgtcttggagcaacttgatgcgttaaagccaagt
atggagggaaaggcgaaagagaagagcagtagacacaaggataagaagaaaagaagccgc
agtagaagcagagagaggagtcgaaagcacaagcacaggtcccgctctagatctagagag
aggacgaagaagtcaggtagatacaggtcaaggagtcgcagccctatcaaaaatcgacac
cggagccctattaaggaggaacacacaagcaaaaaccatcgatctgaaaagagtgatgag
cgctggagggaaaagcatgttgacaggccccctccagaagagccatctatcggtgacatc
tacaatggcaaagtcaccagtattatgcagtttgggtgttttgttcagctggagggcctg
aggaaacgctgggagggcttggtgcacatatccgagctcagaagagaaggacgcgtggca
aatgttgctgatgtcgtcagcaagggtcaaagagtaaaagttaaggtgctttccttcact
ggatgcaaaaccagcctcagtatgaaggatgtcgatcaagacactggagaagatctgaat
cctaacaggaggaggaatctggttggggagaacaatgaggaggcttccatgaggaaccca
gacagacccaaccacctctcattagtaaatgctccggaagttgaagacgacaccttggaa
agaaaacgtctcaccaagatttctgaccctgagaagtgggagattaagcagatgattgct
gccaatgtgctttctaaagaggaatttcctgactttgatgaagagactggtatcctaccc
aaggttgatgatgaagaagatgaagatctggaaattgagcttgtagaagaggagcctcca
ttcttacgaggacacacaaagcagagcatggacatgagcccaattaaaatagtaaagaat
cctgatggttccctgtctcaagctgccatgatgcagagtgctttagcaaaggagagaaga
gaactgaagcaagcacaacgggaggcagaaatggactctatcccaatgggcttaaacaaa
cactgggtggatcctttgccagatgttgatggacgacaaattgctgctaacatgaggggg
attgggatgatgcccaatgatattccagagtggaagaagcatgcctttggaggtaataag
gcctcttatggcaagaagacccagatgtcaatcattgaacagagggagagtctgcctatt
tacaagctgaaggagcagctggtgcaggctgttcatgacaaccagatcttgattgtcatt
ggggaaaccggctcaggaaaaaccacccaaattacccaatatttggctgaagctggatat
actacaaggggtaaaattggatgcactcagcccagaagagtggctgcaatgtctgtggca
aagcgtgtgtctgaagaatacggttgctgtctaggtcaggaggtgggatataccattcga
tttgaagactgcacaagcccagagactgtcattaaatacatgacggacggtatgttacta
agagagtgtctgatagaccctgatctgactcagtatgccattatcatgcttgacgaagcg
catgagaggacaatccacaccgatgtgctgtttgggcttctgaagaagactgtacaaaag
cgtgctgatatgaaactgattgtgacatctgccactttggatgccgttaagttctctcag
tatttctatgaggctccaattttcaccattcctggtcgaacatacccagtagagattcta
tacactaaggagcctgagactgattacctggatgccagcctcatcactgtgatgcagatt
catctgactgaacctccaggtgacattctggttttccttactggtcaagaggaaattgac
actgcttgtgaaatcctctatgagagaatgaagtcacttggccctgatgtgccggagctg
atcatactgccagtgtattctgctttgcccagtgagatgcagacaaggatttttgaccca
gcacctccgggtagtagaaaggttgttatcgccaccaacattgctgagacctcgctgact
attgatgggatctactatgtggttgacccaggttttgtgaaacagaaagtctacaactct
aaaactggaattgatcagcttgtagtaactcccatctcacaggcccaagccaaacagaga
gctggaagagcggggaggacaggtcctggcaagtgttaccgcctttacactgagcgcgca
tatcgtgatgagatgttgactaccaatgtgcctgagattcagagaaccaacttggccagc
accgtcttatcactcaaggcgatgggtatcaatgacctgctctcttttgatttcatggat
gccccacctatggagaccctcatcacagccatggagcagttgtacacccttggagccctg
gatgatgaaggcttgttgactcgtttgggcaggaggatggcagagttccccctggagcct
atgctgtgtaagatgctgatcatgtctgtacatctcggctgcagtgaggagatgctaacc
attgtttccatgctctctgtgcaaaatgtgttctacagaccaaaggataaacaagcactt
gcagaccagaaaaaggccaagttccaccagacagaaggagaccacctaactttgttggct
gtgtacaactcctggaaaaacaacaagttttctaacccctggtgctatgagaactttatt
caggcccgctctttacggcgggcgcaggatatccgcaaacagatgttgggcatcatggac
aggcacaaactggatgtcgtgtcttgtggaaaagcaacagtgagagtacagaaagctatc
tgcagtggcttcttccgaaatgctgccaagaaagatccccaggaaggttaccgaactctt
atagaccaacaagtggtctatattcacccatctagtgccttgttcaacagacagcctgaa
tgggttgtgtaccatgaattagtcttaaccaccaaggagtacatgcgagaggtgactacc
atagacccccggtggcttgtcgaatttgctcctgccttcttcaaagtctctgatccaacc
aaactgagcaagcagaagaaacagcagcgtctggagcccctttataaccgctatgaggag
cctaatgcctggagaatttcccgggccttcagacgtcggtga
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integrated database retrieval system
