Bufo bufo (common toad): 121003287
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Entry
121003287 CDS
T07950
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121003287 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121003287 (ERCC6)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
121003287 (ERCC6)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121003287 (ERCC6)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121003287 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121003287
NCBI-ProteinID:
XP_040290936
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All DBs
Position
6:complement(199419770..199712922)
Genome browser
AA seq
1374 aa
AA seq
DB search
MAEKTPLVGAETKASDFAEPQDNNDWPGPSNTSSHVFCPHGPEMSSRKVQSILQIDRYQI
QAVETAQQALELQGLGLAVYDQEVLEREVLQQVDNAINEANRAARLAEAEKEQQELKNEL
SSCLASIRQITKIIDQLSPQAATCKDICRKLDSVKRQKHNKEQQLKKIKAKQRRLRAALG
GNSEQSDSEQQQVDNLEDDVLPTSLGSMLMPSQDNEWEKLIRTGQMTPFGTKIPPKEEPK
PRKLMLNETSDFEKYLADQAQMAVQRKRPFTPKKDKKRKIRPEAKKDDSAKESVNNLTSI
PSAEKRLKKRMRKLQSKALQTQFRTGILCKKIDDLSPQGSLGDNSEGSVYSPDEREQSME
DDEDDDMMQDSPCSDYELKPLLRKQIIKRPQHWGIDAEFLPSSDEDGGETPRSSSKGRLC
RDDGDVKVYKHRIRQYLKQQAKEKEQRGMAEESEDSDLQFDEGFCIPGSLWKKLYKYQQT
GVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSRIKTRGSDYRYEGLGPSIIVC
PTTVMHQWVKEFHTWWPKLRVAVLHESGSFAGKKVRLIGEIGNSSGILITSYSNVRLMQE
ELLKYHWHYIILDEGHKIRNPNAAVTLACKHFRTPHRIILSGSPMQNNLRELWSLFDFVF
PGKLGTLPVFMEQFSVPITMGGYSNASVVQVKTAYKCACVLRDTINPYLLRRMKADVKMS
LSLPDKNEQVLFCRLTNEQTQVYQTFIDSKVVYGILNGDMQVFPGLIALRKICNHPDLFT
GGTKILKGTKEEDLEEEQQFGYWKRSGKMIVVESLLKIWHRQGHRVLLFTQSRQMLNILE
AFVRRMDYTYLKMDGTTTVASRQPLIIKFNEDSSIFVFLLTTRVGGLGVNLTGANRVVIY
DPDWNPSTDIQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQ
RRFFKSNDLYELFTLSSPDASQGTETSAIFAGIGSDVKLSKYPKKQVTTEVNGISKEGSS
NTIKNEQPLQCMSAPSVTTQSYGTETTELAKGLDKPNSCIAFDSNLRAMNESGQSFSVAP
AQLHHKHKAKTKHQEKGKRKKKGAKYEGKRISYLVKQKPFIKEIKGEQEESRKTSDEYVL
EKLLKKSGVHSVMKHDVIMDASNPDYVIVEEEASRVAQEALRVLKISRQRCNAASSGIPT
STGTNVGVGNRRFGQKKNPLLHCADVPKTKSHQDKCKDLKIIKQEESKTVAASHFSGEAS
ALDSSSTLSSFNLLACMKARNHLILPPREDGDIGSGPQTADPTEHDELLTDMRNFIAFQA
QQEGEATTQELLQEFEHKLSPSQSCVFRELLRKLCTFHRKSDGVGVWRLRPEFL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaactccactcgtgggagcggaaacaaaggcatcagactttgctgagcca
caagacaacaatgattggcctggaccgtcaaacacttcaagccatgttttttgtcctcat
ggtcctgaaatgtcaagtagaaaagtacagtccatcctacagattgaccgctatcagatc
caggctgtggaaactgcacagcaagccctggaactccaagggcttggcttagcagtgtat
gaccaagaagtgttggagcgtgaagtactccagcaagttgataatgccataaatgaggcc
aatcgagctgcacgactagctgaagctgagaaagaacagcaagaacttaagaatgagttg
agttcatgtcttgcctccataaggcaaattacgaaaatcattgaccaactttccccacaa
gctgcaacatgtaaagatatttgcaggaaacttgactctgtgaagcgacagaaacataac
aaagaacagcaactgaaaaaaatcaaggctaagcagagacgtctaagagcagcactgggt
ggcaactcagagcagagtgattctgaacagcagcaggtagataatcttgaagatgatgtg
ttgcccacatctttgggcagtatgttgatgccgtctcaagataatgaatgggaaaagctc
atccgcacagggcagatgacaccctttggcaccaagatacccccaaaagaggaacctaaa
ccaaggaagttaatgctaaatgagacctcagattttgagaaataccttgctgatcaagca
caaatggcagtacagaggaaacgtccctttactcctaaaaaagataaaaaaagaaaaatt
agaccagaggctaagaaggatgatagtgctaaggaatcagtaaataacttgacatccatt
ccatctgctgagaaaaggttgaagaaaagaatgaggaaattacagagcaaagctttgcag
actcaattcaggacaggaatcctatgtaaaaaaattgatgacttgtccccacaaggcagt
ctaggagataacagtgaggggtctgtttattcacccgatgaaagagagcagagcatggag
gatgatgaggatgatgacatgatgcaggatagcccttgctctgactatgaattaaagcct
ctgctgcgaaaacaaattataaagcggcctcagcattggggtattgatgcagagttcctt
ccaagttctgatgaagatggaggagaaactcctcgctcatcatcaaagggtagactatgt
agagatgatggggatgtcaaggtgtacaagcatcgcatacggcagtaccttaaacagcaa
gccaaggagaaagagcaacggggtatggcagaggagtctgaggacagcgatttgcaattt
gatgagggtttctgcataccagggtctctctggaaaaagttgtacaagtaccagcagaca
ggtgttcggtggctgtgggaactacattgccaacaggcaggaggcattttgggagatgaa
atgggattgggcaaaactatccagataatagccttcctggcaggcttgagctacagccgg
ataaagacacgaggctctgattacagatatgaaggcttgggtcctagtatcattgtgtgt
ccaactactgtcatgcaccaatgggtgaaggagtttcatacttggtggcctaaacttcgt
gtagctgtacttcacgagagtgggagctttgctggtaaaaaggttagattaattggggaa
ataggtaatagtagtggtattcttatcacctcttattccaatgtacgcttgatgcaagaa
gaacttctgaagtatcactggcactatattatcttggatgaggggcacaagattcgtaat
cccaatgcagctgtcacattggcgtgcaagcattttcgtactcctcatcgcattattttg
tctggatccccaatgcaaaataatttgcgagagttatggtctctatttgactttgtcttc
cctggaaaactgggtaccctccctgttttcatggagcagttctctgttcccattaccatg
ggaggttattcaaatgcttctgttgttcaggtaaaaactgcatacaaatgtgcctgtgtt
ttgcgcgacaccataaacccttatctcttgagacgtatgaaggcagatgtgaagatgagc
ttgtctcttcctgacaagaatgagcaggttctcttttgccgactgacaaatgagcagaca
caggtttaccagaccttcatagactccaaagtagtgtatgggatactgaatggtgacatg
caggtgtttcctggtctgattgccttgagaaaaatctgcaatcacccagatttgttcaca
ggtggaactaaaattcttaaagggaccaaagaagaggatctagaagaagaacagcagttt
ggttactggaagcggtcaggaaaaatgatagtagtagagtcacttctgaagatctggcat
cgccaaggacatagagttcttcttttcactcagtcacgacagatgttaaatatcctggaa
gcatttgttcgaagaatggattatacatacctcaaaatggatggcactacaactgttgca
tcacgacaacctctcatcataaagtttaatgaggactcctcgatctttgtattccttctt
acaaccagagttggaggtcttggtgtgaatctcactggagccaatagagttgtcatctat
gatcctgactggaatcccagcacagatatacaagctcgagagagggcatggagaattggt
caaaagaaacaagtcactgtttacaggctgctcactgcaggaactatagaagaaaagatt
tatcacaggcaaatctttaagcagttcttaacgaacagagttttgaaagacccaaagcag
agacgcttcttcaaatccaatgatctgtatgagctatttaccctgagcagtcctgatgca
agccaaggaacagaaaccagtgctatttttgcagggattggatcagatgttaagctgtca
aagtatcctaaaaaacaggtgacaacagaagtcaatggtatttctaaagagggttcttcg
aatacaattaaaaatgagcagcctttgcaatgtatgtctgcaccatctgtaactacccaa
tcttatggaacagagaccacagagctagctaaagggctggacaagcctaattcatgtata
gcgtttgattccaacttgcgagctatgaatgaaagtggacagtcattttctgttgctcct
gcacaacttcatcataaacacaaagccaaaacaaaacaccaggaaaaagggaaaagaaaa
aagaaaggtgccaagtatgaaggaaagcggatctcttatctagtaaagcaaaagccattc
attaaggagataaaaggggagcaggaggagagcaggaagactagcgatgaatatgtcctg
gagaaactattgaaaaagtctggggttcatagtgtgatgaaacatgatgtaattatggat
gcatctaatccagattatgtgattgttgaagaagaagcaagtagagtagcccaggaggct
ctgcgagttttaaaaatctctcgccaacgttgtaatgctgcatcttctggaatcccaaca
tcgactggaactaatgttggtgtaggaaatagacggtttggtcagaaaaagaaccctcta
ttacattgtgcagatgtacccaaaaccaagagccatcaagacaaatgcaaggatttaaag
atcattaaacaagaagagagcaaaacagttgctgcctctcatttcagtggagaggccagt
gcattagactccagttccactctgtcttcattcaatttacttgcttgtatgaaggcaaga
aatcatttaatccttcctcccagagaagatggtgatataggaagtggacctcaaacagca
gatcccacagaacatgatgagttactaacagatatgagaaatttcatagcattccaagca
cagcaagaaggagaagcaactacccaggagctgcttcaggagtttgagcataagctttct
ccttcacagtcctgtgtcttccgagaactgctgcgtaaattgtgcaccttccatagaaag
agtgatggtgttggtgtgtggagactcagaccagaattcctctga
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