Bufo bufo (common toad): 121003842
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Entry
121003842 CDS
T07950
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04510
Focal adhesion
bbuf04512
ECM-receptor interaction
bbuf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121003842 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121003842 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121003842 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbuf00535
]
121003842 (COL9A3)
Proteoglycans [BR:
bbuf00535
]
Extracellular matrix (ECM) proteoglycans
Others
121003842 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
121003842
NCBI-ProteinID:
XP_040291700
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Position
6:complement(106893472..106937724)
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AA seq
676 aa
AA seq
DB search
MARFPTIGFLFIIHLMASQGQRIGPPGPPGPQGPPGTLGKDGIDGEVGPPGLPGRPGPKG
APGKPGEAGKPGLSGLPGIDGLTGPDGKPGPDGPPGERGNIGPPGPDGPAGRGPPGPPGL
AGPSGLPGGKGPQGPAGPSGPPGLPGPPGPPGPPGLPGVVPDSNGDLQCPAVCPPGPPGP
PGMPGFKGHTGHKGERGELGKDGQKGEAGPPGSPGIPGSVGLQGPRGARGLVGPQGPAGD
RGPNGFRGPPGPPGPPGKAGDQGVGGPQGYPGPKGDSGKAGPKGMPGGPGPIGEPGMPGK
DGRDGTSGLDGEKGDRGRLGVPGEKGPNGLPGLPGKAGTKGEKGQLGAHGELGEAGPSGE
PGIPGEAGPPGERGVAGPRGGAGGVGLPGPIGTPGVRGFQGPKGNIGDPGLPGPTGIRGG
FGERGPVGAAGPKGDQGIAGSDGLPGEKGEMGPFGPVGQKGEPGLRGEPGPKGISGPNGT
SGILGIPGPPGPMGFQGEQGVPGITGKPGVPGRLSSEQHIRELCGGMINDQIAQLAANLR
RPLAPGLVGRPGPAGPPGPQGTPGRVGHPGSRGPPGYRGPTGDLGSPGFRGNQGDKGDKG
QGGRGIDGPFGDQGEQGAQGVPGTSRDGRDGAHGEPGYPGEPGRSGAVGAQGTPGICDTS
ACQGAVAAVKSGSKKS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggttcccaactattgggttcctttttataatccacctaatggcatctcaaggg
cagagaattggaccaccaggacctccaggtccacagggaccccctggaacactgggcaag
gatggaatagatggtgaagtcggcccccctggtttacctggacgcccaggtccaaaagga
gcccccggaaaaccaggtgaagctggaaaaccaggactgtctggactgccaggtattgat
ggactgactggacctgatgggaaacctggccctgatggaccaccaggagaacggggaaac
attggaccacctgggcctgatggacctgcaggaagaggaccacctggacctcctggtctt
gctggaccaagtggtttaccaggcggtaaagggccccaaggtcctgcgggaccttctggc
ccacctggacttcctgggcctccaggaccaccaggccctccaggtcttcctggagttgtt
cctgatagcaatggagacctccagtgtccagctgtttgcccaccaggacctcctggtccc
ccaggaatgccaggttttaagggacacacaggacacaaaggagaacgaggggaacttgga
aaggatggtcaaaagggcgaggcgggtcctcctgggtcaccgggaatccctggcagtgtg
ggattacagggcccaagaggtgcaaggggcctagttggacctcagggacctgcaggagac
aggggacccaatggatttagaggaccccctggtcctccaggaccccctgggaaagctggg
gatcaaggcgtaggaggacctcagggatatcctggacctaaaggtgactctggaaaagct
ggtcccaaggggatgccaggtggtccaggtcccataggagagccaggcatgccagggaag
gatgggcgtgacgggacctctggcctggacggtgagaagggtgatcgtggaaggctagga
gttcctggtgagaaggggccaaatggactcccagggcttcctggcaaagctggaactaag
ggagagaaaggtcaactgggcgcccatggagaactaggagaagccggcccctctggagag
ccaggtattcccggtgaagctggacctccaggagaaagaggagtggctggacccagagga
ggagctggtggtgtcggtctcccaggaccaattggtactcccggagtgcgtggcttccag
ggcccaaaaggcaacattggtgaccccggcttacctggacctactggaatccgtggtgga
tttggagaacggggtcctgttggagctgctggccccaaaggcgaccagggcattgcgggt
tctgatggacttccaggtgaaaagggggagatggggccatttggaccagttggacagaaa
ggagagccaggactgagaggtgaacccggccccaaaggtatttctggaccgaatggaaca
tctggcatactaggaatccctggtccaccaggtccaatgggtttccaaggagaacaagga
gttcctggcatcacaggaaaacctggtgtccctggcaggctgtcaagtgagcagcatatc
cgggagttgtgcggtggaatgatcaatgatcaaattgcacagctagcagctaatttaaga
agacccttggctccagggttggtcggtcgaccaggacctgctgggccacccggacctcaa
ggtactcctggacgtgtaggacatcctggtagtcgtggacctccaggatacagagggcca
actggagatttgggatctccaggtttcagaggcaatcaaggtgacaaaggagacaaagga
caaggtggacgaggtattgatggaccatttggtgatcaaggagagcaaggtgcacaagga
gtacccggaacaagcagagatggtcgggatggtgctcacggtgagcctggttaccctggt
gagcctggaagatctggtgcagttggagctcaaggaactcctggaatatgtgacacatcc
gcttgccaaggtgcagttgctgcagtaaaatctggttccaaaaagtcataa
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