KEGG   Bufo bufo (common toad): 121003842
Entry
121003842         CDS       T07950                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf04510  Focal adhesion
bbuf04512  ECM-receptor interaction
bbuf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121003842 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121003842 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121003842 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:bbuf00535]
    121003842 (COL9A3)
Proteoglycans [BR:bbuf00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   121003842 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 121003842
NCBI-ProteinID: XP_040291700
LinkDB
Position
6:complement(106893472..106937724)
AA seq 676 aa
MARFPTIGFLFIIHLMASQGQRIGPPGPPGPQGPPGTLGKDGIDGEVGPPGLPGRPGPKG
APGKPGEAGKPGLSGLPGIDGLTGPDGKPGPDGPPGERGNIGPPGPDGPAGRGPPGPPGL
AGPSGLPGGKGPQGPAGPSGPPGLPGPPGPPGPPGLPGVVPDSNGDLQCPAVCPPGPPGP
PGMPGFKGHTGHKGERGELGKDGQKGEAGPPGSPGIPGSVGLQGPRGARGLVGPQGPAGD
RGPNGFRGPPGPPGPPGKAGDQGVGGPQGYPGPKGDSGKAGPKGMPGGPGPIGEPGMPGK
DGRDGTSGLDGEKGDRGRLGVPGEKGPNGLPGLPGKAGTKGEKGQLGAHGELGEAGPSGE
PGIPGEAGPPGERGVAGPRGGAGGVGLPGPIGTPGVRGFQGPKGNIGDPGLPGPTGIRGG
FGERGPVGAAGPKGDQGIAGSDGLPGEKGEMGPFGPVGQKGEPGLRGEPGPKGISGPNGT
SGILGIPGPPGPMGFQGEQGVPGITGKPGVPGRLSSEQHIRELCGGMINDQIAQLAANLR
RPLAPGLVGRPGPAGPPGPQGTPGRVGHPGSRGPPGYRGPTGDLGSPGFRGNQGDKGDKG
QGGRGIDGPFGDQGEQGAQGVPGTSRDGRDGAHGEPGYPGEPGRSGAVGAQGTPGICDTS
ACQGAVAAVKSGSKKS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggcaaggttcccaactattgggttcctttttataatccacctaatggcatctcaaggg
cagagaattggaccaccaggacctccaggtccacagggaccccctggaacactgggcaag
gatggaatagatggtgaagtcggcccccctggtttacctggacgcccaggtccaaaagga
gcccccggaaaaccaggtgaagctggaaaaccaggactgtctggactgccaggtattgat
ggactgactggacctgatgggaaacctggccctgatggaccaccaggagaacggggaaac
attggaccacctgggcctgatggacctgcaggaagaggaccacctggacctcctggtctt
gctggaccaagtggtttaccaggcggtaaagggccccaaggtcctgcgggaccttctggc
ccacctggacttcctgggcctccaggaccaccaggccctccaggtcttcctggagttgtt
cctgatagcaatggagacctccagtgtccagctgtttgcccaccaggacctcctggtccc
ccaggaatgccaggttttaagggacacacaggacacaaaggagaacgaggggaacttgga
aaggatggtcaaaagggcgaggcgggtcctcctgggtcaccgggaatccctggcagtgtg
ggattacagggcccaagaggtgcaaggggcctagttggacctcagggacctgcaggagac
aggggacccaatggatttagaggaccccctggtcctccaggaccccctgggaaagctggg
gatcaaggcgtaggaggacctcagggatatcctggacctaaaggtgactctggaaaagct
ggtcccaaggggatgccaggtggtccaggtcccataggagagccaggcatgccagggaag
gatgggcgtgacgggacctctggcctggacggtgagaagggtgatcgtggaaggctagga
gttcctggtgagaaggggccaaatggactcccagggcttcctggcaaagctggaactaag
ggagagaaaggtcaactgggcgcccatggagaactaggagaagccggcccctctggagag
ccaggtattcccggtgaagctggacctccaggagaaagaggagtggctggacccagagga
ggagctggtggtgtcggtctcccaggaccaattggtactcccggagtgcgtggcttccag
ggcccaaaaggcaacattggtgaccccggcttacctggacctactggaatccgtggtgga
tttggagaacggggtcctgttggagctgctggccccaaaggcgaccagggcattgcgggt
tctgatggacttccaggtgaaaagggggagatggggccatttggaccagttggacagaaa
ggagagccaggactgagaggtgaacccggccccaaaggtatttctggaccgaatggaaca
tctggcatactaggaatccctggtccaccaggtccaatgggtttccaaggagaacaagga
gttcctggcatcacaggaaaacctggtgtccctggcaggctgtcaagtgagcagcatatc
cgggagttgtgcggtggaatgatcaatgatcaaattgcacagctagcagctaatttaaga
agacccttggctccagggttggtcggtcgaccaggacctgctgggccacccggacctcaa
ggtactcctggacgtgtaggacatcctggtagtcgtggacctccaggatacagagggcca
actggagatttgggatctccaggtttcagaggcaatcaaggtgacaaaggagacaaagga
caaggtggacgaggtattgatggaccatttggtgatcaaggagagcaaggtgcacaagga
gtacccggaacaagcagagatggtcgggatggtgctcacggtgagcctggttaccctggt
gagcctggaagatctggtgcagttggagctcaaggaactcctggaatatgtgacacatcc
gcttgccaaggtgcagttgctgcagtaaaatctggttccaaaaagtcataa

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