Bufo bufo (common toad): 121004013
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Entry
121004013 CDS
T07950
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
121004013 (SORCS1)
Membrane trafficking [BR:
bbuf04131
]
Protein recycling
Others
Others
121004013 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
121004013
NCBI-ProteinID:
XP_040291967
LinkDB
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Position
6:15256668..15904008
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AA seq
1305 aa
AA seq
DB search
MGGLPDWGLLLLLITILRIAKEGKGDLTCSSCHHHIRLQGTGAGHIVKRVQGGAPGDWPE
TFANAGHLTVNGQMQDHWDDGRDLGTWSRAGGGGDGRYWADGYEGAGDRLGDASASFLET
WVNQEGQEKTRGQGEHVAAEFFMDVDSDLSGRTDQIVDANERNVQLVGEGQDWGSQTSGT
MQTDQFGGTRNDEGDSVSGAMATDPLEGAAFPTHSHMPSGHSARDSREMPSRTGRRIREA
EGHRVARAQAGDPDRGSRFRVEELKLSSTTFALTGDSAHNQAMVHWSGHNSSVILILTKL
YDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESS
LMISSDEGATYQKYRLNFFIQSLLFHPKQEDWILAYSQDQKLYSSSEFGRRWLLLSESVA
PNRFYWTVTVSNRDADLVHLETKTPEGHAQYIVCKMNNCSETVRTKPFAGYIDTNSLIVQ
DEYVFVQLTSGGRPHYYVSYRREPFAQMKLPKYALPKDMHVISTDENQVFVAIQEWNQNE
TYNLYISDTRGIFFTLALENVKSIKGPEGNVMIDLYEVAGIKGMFLANKKTDNQVKTFIT
YNKGRDWHLLQAPDVDLRGNPINCILPYCSLHLHLKVSENPYTTGNIASRDTAPGIIVAS
GNIGSELTETDISMFISSDAGNTWRQIFDEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSF
DEGRTWSKYTFTSNPLFVDGVLGEPGEETLIMTVFGHFGHRSEWQLVKVDYKSIFDRRCN
PEDYLPWQLHSQGEACIMGARRTYMKRRSERKCMQGKYAGAMSSEPCVCTEADFECDYGY
ERHSNGQCLPAFWYNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQQCPG
KAPHGLRVTTLDGKLTAEQGHNVTFVLQLEEGDIQRTNIQVDFGDGIAASYANLSATEDG
IKHVYQNVGIFRVLVQVDNSLGSETSVLYLHITAPLEHIHLVLPFVTTKNKEVNASVVLW
PSNVGTLTYVWWLGNNSEPLITLDRSISFTFAVEGMNSITVQVSAGNTILQDTKTIAVYE
QFQSLRLSFSPNLDDFNPDIPEWRRDISRVIKRALMYATGVSSKQILVAVLPGLPTSAEL
FILPYQDSAEENKKITEDLTQISDVFISKLNQEMVHFELKPGVRIMVHVAHLTAAPLVDM
TPSHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGYNVYAQMQNEKERETVSPGSQNENLS
PNVPHTQPMGPEQLLEGKLETQPIGSISMVAENQSTNENPTYVNV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggggggtctcccagactgggggctgctgctcttactcatcactattttaaggattgca
aaagagggcaaaggagacctgacctgctcatcctgtcaccatcacattcgtctgcagggc
acaggcgctgggcacattgtcaagagggtgcaggggggtgcaccaggtgactggccggag
actttcgccaacgctggccacctgacggttaacggtcagatgcaggatcactgggacgat
ggccgggatctcggaacctggagcagggcggggggagggggcgatggcagatattgggct
gatgggtatgaaggggccggtgacaggttaggggatgccagtgccagctttttggagact
tgggttaatcaagagggtcaggagaagactagggggcaaggggaacatgtggctgcagaa
ttcttcatggatgtagacagtgatttgagtggcaggaccgatcagattgtggatgccaat
gaaaggaatgtccaattggtgggtgagggtcaggattggggttcccagaccagtggcacg
atgcagactgaccagtttggagggactaggaatgatgaaggtgacagtgtgagtggagcg
atggctactgaccccctcgaaggtgcagcgttcccaacacacagccatatgccaagtggg
cactctgccagagactctcgagagatgcccagcaggacagggagacggatcagagaagcc
gagggacacagggtggcccgagcacaggccggtgacccggacagggggagccgctttcgt
gtggaggaactgaagttaagcagcacaacgtttgctctgaccggagactctgctcacaac
caagccatggtgcactggtccggacacaacagcagcgtgatactaattctgacaaagctg
tacgattacaacctgggaagcatcacggagagctctctttggaggtcgacagactacggg
acgacttacgagaagctgaatgataaagtcggattaaaaacaatcttgagctacctttat
gtctgccctacaaacaagcgtaagatcatgctcctgaccgacccagagatcgagagtagt
cttatgatcagctcggatgaaggggccacctatcagaaatacagactcaacttcttcatc
cagagcctgctgtttcatcccaagcaagaggactggatcctggcctacagccaagaccag
aagttgtacagctcctcagagttcggaagacgttggctgctgctcagtgaatcggtggca
ccaaatcggttttactggactgtgaccgtgtctaaccgagatgctgacctcgtccactta
gagactaagaccccggagggacatgctcagtacatcgtctgtaaaatgaacaactgctcg
gagacagtcaggacgaagccctttgcaggatacatcgacactaactccctcatcgtccaa
gatgaatatgtcttcgtccagctcacctctggaggacgcccacactattacgtttcctac
agacgagagcccttcgcacagatgaagctgccgaagtacgctctgcccaaggacatgcac
gtgatcagcaccgatgaaaaccaagtgtttgtcgccatccaagagtggaatcagaatgag
acgtacaatctgtacatctccgacacgcgagggatattctttacactcgctctggagaac
gtgaagagcatcaagggtccggaggggaatgtcatgattgacctctatgaggtagcaggg
ataaaggggatgttcctggcaaacaagaagactgacaaccaggtaaagactttcatcacg
tacaataaaggacgagattggcacctgctgcaggctcctgatgtggatctgcgaggaaat
cccatcaactgcatattgccatattgttctttacatctacacttgaaggtatctgaaaat
ccctatacaaccggtaacatcgccagcagggatacagctcccggaatcatcgtggcttca
gggaacatcggatcagagttaacagagactgatatcagcatgttcatttcctcggatgcc
ggcaatacatggagacagatctttgacgaggagcacagcgtcctgtacctggatcaaggt
ggagtgctggtggccatgaagcacacctctctacccatccgccacctatggcttagtttt
gatgaagggagaacctggagtaaatataccttcacatctaatcctctttttgtggacggc
gttttgggagagccaggggaagagacgttgatcatgacagtctttggacactttggtcac
cggtcagagtggcagcttgtgaaagtggactacaagtcaatttttgacaggcgttgcaat
cctgaagattatcttccctggcagcttcacagtcagggagaggcctgtattatgggagct
aggagaacctacatgaaacgaagatcagaaaggaagtgcatgcagggaaaatacgctggg
gccatgtcttcagagccttgtgtctgcacggaggcagattttgagtgtgattacggctat
gaacggcacagcaatggtcaatgcctgcctgcattctggtacaacccatcgtccttgtcc
aaagactgcagtcttgggcaaagctacctgaacagcaccggttacaggaaggtcgtgtcc
aacaactgcacagatggtgttagagagcagtacaccgccaaacctcagcagtgtccgggg
aaagctccacatggtctccgagtcacaacactggacggaaagttgactgcagaacaagga
cacaatgtcacatttgtgctgcaattagaggagggtgatattcaaagaactaacattcag
gttgactttggtgacggcatagcagcttcttatgctaatctcagtgctacagaggatggc
atcaagcatgtctatcagaacgtgggcatctttagggtcctggtgcaagtagacaacagt
ctaggctctgaaacgtctgtgctttatctccacataacagcccccctggaacacattcac
ttggttttgccttttgtcaccacaaagaacaaggaggtcaacgcttcggtggtactctgg
ccaagcaacgtggggaccctcacctatgtatggtggctcggaaataacagtgagcccctc
atcacgctggatcggagcatctcatttacgtttgcagtagaagggatgaacagcatcact
gtgcaggtgtctgctgggaacaccatcctacaggacaccaagaccattgcagtgtatgag
cagtttcagtctctgcgattgtcgttttcaccaaatctcgatgattttaaccccgacatt
cccgaatggaggcgagacatcagccgtgtgattaagagagcactcatgtatgccacaggc
gtgagcagcaaacagattttagttgcggtcctcccgggactacccacgtcagccgagctc
ttcattctcccctatcaggacagtgctgaggagaataagaagataacggaagatctgacc
cagatctctgatgttttcatcagcaagcttaatcaagagatggttcatttcgagctgaag
cccggagtccgtattatggttcatgtcgcccatttaacagcagcccctctggtggacatg
actccgagtcacagcggctctgccatgctgatgctcctatccgtggtcttcgttggactg
gccgtcttcgtcatctataaattcaaaaggaaaattcctggatataatgtatatgcacag
atgcagaatgagaaagagcgagagacggtcagtccaggcagtcaaaatgagaacttgtca
cctaatgtccctcacactcagccgatgggccctgagcagctgttagagggcaagttggaa
acacagcccataggaagtatttcaatggttgctgaaaatcaaagcacaaatgaaaacccg
acctatgtaaatgtgtga
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