Bufo bufo (common toad): 121004064
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Entry
121004064 CDS
T07950
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbuf03009
]
121004064 (DDX21)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121004064 (DDX21)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121004064 (DDX21)
Ribosome biogenesis [BR:
bbuf03009
]
Eukaryotic type
Pre-60S particles
Helicases
121004064 (DDX21)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121004064 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
121004064
NCBI-ProteinID:
XP_040292070
LinkDB
All DBs
Position
6:complement(105490419..105520001)
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AA seq
764 aa
AA seq
DB search
MPGLLQNGEMESGVGKKKKISETPTPKKMKRKIHNGETEEPDFEQVSNINEEVTEDCNNN
KQTPKHKKKKHAKKERSPEAAEQIDEEQEVTKAPKVKKSKKKTPKIEQEESEQQNTAESE
PQINGKKSGKKSKAEKTSTTENGEVQSTNNDAPQAKKRKTEPEAEANAEETKSDDEETAL
EKKDGDFSNYPISEETITNLKAKGVTYLFPIQAKTFHTAYSGKDVVVQARTGTGKTFSFA
IPLIEKLIQDKSPLVQGRPPRVLILTPTRELAIQITNEVRSISKKLKTCCFYGGSPYQQQ
VFSIKTGIDILVGTPGRIRDLIQNYKLNLTVLKHVVLDEVDMMFDMGFSEQVEEILSARY
KSDPDDNPQTLLFSATCPDWMYNVAKKYMKKVYEKIDLVGHRSQRAAITVEHLAIECNRY
QKPVVLGDVIQVYSGSHGKTIVFCDSKLEAHELSTNCGSLKQTAKALHGDLQQKEREVIL
KGFRSGSFNILIATNVAARGLDIPEVDLVVLYSAPKEADSYVHRSGRTGRAGRTGICISL
YESRDRYYLNNVERSTGITFKRVGIPSVLNVAKSSSADAIKSLDSVSADVIEQFKTYAEE
LIEKKGAVNALAAALAHMSGASSLKQRSLLNMEPGFVTVLLESSVAIHTLSYVWRSIKEQ
MGEDIDSKIHRMCPLKNLMGACFDVKPETLKAMQDAWGSSRRWKFSVATELPELQESKSD
MEGSRGRGFGGRGGGGRSFDRRRGGNNRNSSQRGGNRRGGFRRR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccgggattacttcaaaacggagaaatggagagcggagtcggcaagaagaagaaaata
tctgaaactcccacacccaagaagatgaaaagaaaaatccacaatggggaaacagaagaa
ccagattttgagcaagtttctaatatcaatgaagaagtgaccgaagactgtaataacaat
aaacagacaccgaaacataagaaaaagaagcatgccaaaaaagagcgttctcctgaagca
gctgagcaaatagacgaggagcaggaagtcaccaaagctcctaaagtcaagaaatcaaag
aagaaaacgccaaaaatcgagcaggaagaatcagaacagcaaaacacagcagaatctgaa
ccacagatcaacggcaaaaagagtggtaaaaaatccaaagcggagaaaacctcaacgact
gagaatggagaagtacaatccacaaataacgacgccccacaagcaaagaaaaggaaaacg
gagccagaggcagaggcgaacgcggaggaaaccaaatcggatgatgaggagactgccttg
gaaaaaaaggacggcgacttttctaattatcctattagtgaagaaaccattacaaatctg
aaggcaaaaggagtgacttacctgtttcctattcaagccaaaaccttccatactgcttac
agtggtaaggatgttgtagtccaggctcgcactggtactggcaaaaccttctcatttgca
atccctctgattgaaaaactaatccaggacaaatccccattggtgcaaggacgacccccc
agggtgcttatcctcacacccaccagagaactggcaatccagataacgaatgaagttcgc
agcatctctaaaaagctgaagacctgttgtttctatggagggtctccttaccagcagcaa
gtattttccataaaaactgggattgatatcctggtggggactcctggccgtataagagat
ctcatccagaactataagctgaatctgaccgttctgaaacacgtggtcttggatgaagta
gacatgatgtttgacatggggttttctgagcaagttgaagaaatattatctgctcgttat
aaatctgatccagatgataatcctcagacccttctcttctctgcgacctgccccgattgg
atgtataatgttgctaagaaatacatgaaaaaagtatatgaaaaaattgaccttgttgga
caccgtagtcagagggctgccatcactgtggagcacttggccattgagtgtaacagatac
cagaaaccagtcgtccttggtgatgtcatccaggtgtacagtggaagccatggaaaaaca
attgtcttctgtgactccaagttggaagctcatgaattgtcaacaaactgcggctcatta
aagcagaccgccaaagcattacatggagatcttcagcaaaaggagagggaagtcatcttg
aaaggctttagaagtggctcttttaatatattaattgcaaccaatgtcgctgcccgtggt
ctagacattccagaagtggatctcgttgtgttatattctgcaccaaaggaagccgattct
tacgtccaccgttcaggacgcacaggcagagcaggacgcacaggaatctgcatttccctt
tatgaatccagagacagatattacttgaacaatgttgagagaagtacggggatcaccttc
aagagagttggaattccatccgtattgaatgtggccaagtcatccagtgctgatgccatc
aagtcattggactctgtctcggctgatgtcattgaacagtttaaaacatacgcagaggag
ctcatcgagaagaaaggggctgtcaatgcattggcagcagcgttggctcatatgtctggg
gcttcatccctgaagcagcgatcacttcttaacatggagccgggctttgttacagtgcta
ttggagagttcagtggccatccacaccctttcttatgtttggcgttccattaaagagcaa
atgggagaagatattgattcaaaaatacacagaatgtgcccactaaagaacctcatggga
gcgtgttttgatgtaaagccagaaactcttaaggcaatgcaggacgcctggggcagctca
agacgctggaagttttcagtcgcaacagaattacccgaacttcaggagtcaaagagtgac
atggaaggctcccgcggcagaggttttggaggcagaggaggaggaggaagatcttttgac
agaagacgtggcggcaataacaggaattcatcccagagaggaggaaacagacgtggaggc
tttagaaggcgctga
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