Bufo bufo (common toad): 121004671
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Entry
121004671 CDS
T07950
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121004671 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbuf04990
]
121004671 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
bbuf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121004671 (LDB3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121004671
NCBI-ProteinID:
XP_040292864
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All DBs
Position
6:complement(239294339..239511686)
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AA seq
772 aa
AA seq
DB search
MAYNVSLAGPGPWGFRLQGGKDFNMPLTISRVTPGSKAAQSNVNQGDMVVAIDGVSTDGM
THLEAQNKIKSASYNLSLTLQKSKRPGPVPTATPRMDSPMPVIPHQKDHALEINGRTVFS
ALSNTTAMPLTGSVTTNGTMSGYLNKQEIHHSHSNSFVKTSSLRSSMSSHSIASEASSIR
RSIGPKPDVLVNDENNTNSQFSPAKKRLYNNPIGLYSAQTVNEMAEIHNLSLKGRASGGG
LLRGNLPVKDPLVDIASPVYQAVLKNQGKSEYEIDDWARRAANLQSKSFRVLAQMTGTEY
MQDPDEDALRRASGKENAPKSPEASPTGTSVPQTATYKVWQPSKSSTMNGNSVQTNAVPS
RGYSVRFGVDKSPRQPTYTSQKVLKPSPPVTSSYKRVPTAANMSPSQIKPSQGAKNVSAA
ASTISCAISAQSSLHQQASFSSSYQSKISSSSQAYSSNTAAKGPMPYGGHTEPSAPAAKP
RVVTTASIKPSVYQPSQGPSPGFAPSPATTYSAPQQEPANRPPWITDEAFNQKFAPGKST
TTISKQVLPKAAPPPPTPITTPSYTPQPASQPPTQVPRGLIQRAERFPASSRTALCGHCN
SIIRGPFLVAMGRSWHPEEFNCAYCKSSLADVSFVEEQKNVYCERCYEQFFAPTCARCNT
KIMGEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFP
VEAGDKFIEALGHTWHDSCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaatgtatccctcgctggacccggcccgtggggattccgtctgcaaggagga
aaggactttaacatgcccttgaccatctccagagtaactccaggcagtaaagcagcacag
tccaatgtaaaccaaggggacatggtggtggctattgatggagtaagcacagatggcatg
acacacttagaggcccagaataaaatcaagtctgcaagctacaatctgagcctcactcta
cagaagtcaaaacgtccaggtccagttccaacagccacaccacgaatggactctccaatg
ccggtaatccctcatcagaaggaccacgctttggaaattaatggcagaacagtcttcagt
gctctgtctaacacaactgctatgccactgactggtagcgtgaccaccaatgggacaatg
tcaggctacctcaacaagcaagagatccaccattcacatagcaactcctttgtaaagaca
tcatcacttagatcttccatgtcttctcattctattgcttctgaagcttcctctatcagg
cgcagtataggtcctaagcctgatgttttagtcaatgatgagaacaataccaacagtcag
tttagccctgctaagaaaagactatacaacaaccccattgggctctattcagcacagact
gttaatgaaatggctgagatacataatttgagtctcaaaggaagggcttcaggaggtggt
cttcttagaggtaacctgccagttaaagatcctcttgtagacattgcttctccagtatat
caggctgtgcttaaaaatcagggcaaaagtgaatatgagattgacgactgggcacgtcgt
gctgccaacctgcagtccaagtcattccgtgtccttgcacagatgacaggaacagaatac
atgcaagaccctgatgaagatgctctgagaagagcaagcggcaaggagaatgctccaaaa
tctcctgaagcaagtcctacaggtacctcagtgccacaaactgccacctataaggtttgg
caaccttctaagtcttcaaccatgaatggcaattctgtccaaacaaatgcagtgccttca
agaggttattccgtgaggtttggggtcgacaaaagtccaagacaacccacttataccagc
cagaaagtgcttaaaccatcaccccctgttacatcctcttataaaagagtacctacagct
gccaacatgtctccttcacaaatcaaacccagccagggagctaagaacgtttccgccgca
gcctccactatatcttgtgccatatcagcacagtctagccttcatcagcaagcatccttt
tcttccagctaccagtcaaaaataagttcttctagccaagcctattcttccaatactgct
gccaaaggtcccatgccttatggaggacacactgagccttcagctcctgctgccaagcct
cgagtagtaaccactgcgagtatcaaaccatctgtttatcagccaagccaaggtccttct
ccaggctttgcaccatcacctgccactacttactcagcaccccaacaagagccagccaat
cgccctccatggataactgatgaagcctttaatcaaaaatttgcccctggaaaatctaca
accaccatttctaaacaggtcctgccaaaagcagcacctcctccacccactccaatcacc
actccaagctatactcctcagcctgctagccaaccaccaacacaagtaccaaggggactg
attcagcgtgctgaaagatttccagcaagcagcaggactgctctttgtggacactgcaac
agcatcatcaggggtccctttttagtggccatgggtcgatcatggcatccagaggaattt
aactgtgcatactgcaagtcttccctagctgatgtgagctttgttgaggagcagaagaat
gtctactgtgaacgatgctatgagcagttctttgctcccacctgtgcccgctgcaatact
aaaattatgggggaagtgatgcatgccttgaggcagacctggcacaccacctgctttgtt
tgtgctgcctgcagaaagccgtttggtaacagcctcttccatatggaggatggagagcca
tactgtgagaaagattatattgctttgttcagtacaaaatgccatggatgtgattttcct
gttgaagcaggtgacaaattcattgaggcccttggacacacttggcatgattcctgcttc
atctgtgctgtttgccatgtgaatttggagggccaaccattctactccaagaaggacaag
cccctgtgcaagaaacatgcccatgctatcaatgtctaa
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