Bufo bufo (common toad): 121004854
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Entry
121004854 CDS
T07950
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121004854 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121004854 (RAE1)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121004854 (RAE1)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121004854 (RAE1)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121004854 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
Op_neuropeptide
Motif
Other DBs
NCBI-GeneID:
121004854
NCBI-ProteinID:
XP_040293178
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All DBs
Position
6:complement(138439291..138458812)
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AA seq
369 aa
AA seq
DB search
MSLFSSSGGFGAGGTGMFGGGTTADNHNPMKDIEVTSPPDDSIACLSFSPPTLPGNFLIA
GSWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQ
SLQIAQHDAPIKTVHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPLMTLQLPERCYCADVV
YPMAVVASAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR
VAIHYINPPNPAKDNFTFKCHRSNGTNTAAPQDIYAVNGIAFHPVHGTLATVGSDGRFSF
WDKDARTKLKTSEQLDQPISACSFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAA
EELKPRNKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttcagttccagcgggggctttggcgctggagggacaggaatgtttggagga
ggcacaaccgctgataaccataatccaatgaaggacattgaggtcacctccccccctgat
gacagcatcgcctgcctctccttcagccccccaacattaccggggaacttcctcatcgcc
ggttcctgggccaacgatgttcgttgctgggaagtgcaggacaatggacagaccatccct
aaggctcagcagatgcacacaggaccagtgctggatgtgtgctggagtgatgacggcagt
aaagtgttcacagcctcttgtgataaaacagccaaaatgtgggatctgaacagtaaccag
tccttacagatcgcccagcacgatgcgccgatcaagaccgttcactggataaaagctccg
aactacagctgcatcatgactggaagctgggacaaaacccttaagttttgggacacacgt
tccccaaaccctctgatgacgcttcagcttcctgagcgatgttactgtgcagatgtggtc
tatcctatggccgttgtagccagtgcagaaagagggttaatagtttaccagctagagaac
cagccctctgagttccgaaggattgagtctcccttaaaacaccagcaccgatgtgtcgcc
atatttaaagacaaacagaacaagccaaccggctttgccttgggcagtattgaaggaaga
gtcgctatccattacatcaaccccccaaatccagccaaagacaactttacattcaaatgt
catcgatccaatgggacaaacactgcagctcctcaggacatttatgcagtaaacggcatc
gcctttcatccggtacacggcactttggccacggtcggctctgatggacgcttcagcttc
tgggacaaggacgctcggacaaaactgaagacttcagagcaactggaccagcccatctct
gcttgcagtttcaaccacaacggaaacatctttgcctattcctccagctatgactggtcc
aagggccatgagttctacaatccacagaagaaaaattacatcttcctgcgtaatgctgct
gaggagctaaaaccgcggaataagaaataa
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integrated database retrieval system
