Bufo bufo (common toad): 121004865
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Entry
121004865 CDS
T07950
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
121004865 (RBM39)
Spliceosome [BR:
bbuf03041
]
Common components
Common spliceosomal components
General mRNP proteins
121004865 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
121004865
NCBI-ProteinID:
XP_040293198
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All DBs
Position
6:327293442..327334933
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AA seq
540 aa
AA seq
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MADDIDIEAMLEAPYRKDENKLNSANGHEERSKKRKKSKSRSRSRERKRSKSREKKRSRE
RERKRSKSREKKRSRSKERKRSRSRSKDRRFRGRYRSPYSGPKFGSSMRGKMGVPHNVKL
RRRSKSKSPQKKEKSPVRGPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD
VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN
LQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDS
ECAKKALEQLNGFELAGRPMKVGHVTERTDASNASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQSRISQQSEALAAAAAAASAAAITLSSS
TLPVPAATQPLATQCFQLSNMFNPQTEDEQGWDTEIKDDVIEECNKHGGVVHIYVDKNSP
QGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTSTQLLFPVRR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacattgatatagaagcgatgctggaagcgccctaccggaaggacgagaac
aaactgaacagtgccaatggacatgaagagcgcagcaagaagagaaagaaaagtaaaagc
cggagtcgcagccgtgaaagaaagcgtagcaagagcagggagaagaaacgcagtagggag
cgggaaaggaaaagaagtaaaagcagagaaaaaaagcgcagtcgcagtaaagaacgtaag
aggagtcggtcaagaagcaaagatcggagatttagaggccgttatcgaagtccatattcc
ggaccaaaatttggcagctccatgcgaggcaaaatgggagtaccgcacaacgtgaagcta
aggcgtcgttcaaagagcaaaagcccacaaaagaaagagaaaagccctgtaagaggtcca
attgataatttaacaccggaagaaagagatgcacgcactgtcttttgtatgcaactggca
gcaagaatccgccccagagaccttgaagaatttttctctacggttggcaaggttcgtgat
gtgaggatgatatccgaccgaaattccaggcgttctaaagggatagcttatgtcgagttt
gttgatgttagctctgtacctctagcaattggtttaacaggacagagagttttgggtgtt
cccataatagtgcaggcatctcaggcagaaaagaacagagctgctgcaatggctaataat
ttacagaaaggcaccgcaggaccgatgaggttatatgttggatctctgcattttaacata
actgaagacatgctgcgaggaatatttgaaccatttggcagaattgagagtattcagctt
atgatggacagcgaaactggccgctcaaagggatatggctttattactttttcggattct
gaatgtgccaaaaaagctctggagcagttaaatggatttgaattggctgggcgtcctatg
aaggttggccatgtgacagagcgtactgatgcttcaaatgccagttcatttttggatagt
gatgagctcgagagaactggaatcgatcttggtactactggtagacttcagctgatggca
aggcttgcagaaggcacaggattgcagatacctccagctgcccagcaagctttgcagatg
agtggctctttggcttttggtgctgttgcagatcttcagtcaagaatttcacaacaaagt
gaagctcttgctgctgccgccgccgctgcctctgctgctgcaatcacgttgtcatcctcc
actttaccagttccagcagccactcaaccacttgccactcaatgcttccagctgtcaaac
atgtttaacccacaaacggaagatgagcaaggttgggacacagaaataaaagatgatgta
attgaagaatgcaacaaacacggaggagttgttcacatttatgtagacaaaaattcacca
cagggtaatgtttatgttaaatgtccaaccatagcatctgcaattgcagcagtcaatgct
ttgcatggaaggtggtttgctggcaagatgattactgctgcatatgtccctcttccaaca
taccacagcctcttcccagattccatgacatctactcagctactgtttcctgttcgtcga
tga
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