Bufo bufo (common toad): 121005042
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Entry
121005042 CDS
T07950
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
121005042 (SOX5)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121005042 (SOX5)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
121005042
NCBI-ProteinID:
XP_040293489
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Position
1:238290238..238499339
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AA seq
813 aa
AA seq
DB search
MLGTVDGGIDGHQVLETLQVPFKQSEVASVTKGYCAGFSMLTEPDVPPEFERMSSKRPAS
PYGEADGEVAMVTSRQKMEDEESGGLAAFHLPLHASFPNKTQSEEFQAVSLLTQDTCDHR
SPTYQHNSMDIDGNKAVSSFAPQNSATSPLKADEGGRQSGESLSNTALGTPERRKGSLAD
VVDSLKQRKMEELIKSEPEETPSIEKLLSKDWKDKLLAMGSGNLGDIKGTPESLAEKERQ
LMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHK
INLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAAAQQGFLIPPGFSYKAGCSDPYPLQLI
PTTMAAAAAAAATPGIGPLQLQQFYAAQLAAMQVSPGNKMPGMPQGNLAAMSPTSMNTEK
STSSPPPKNKDDVTQPLNLSARPKTSDRKSPASPASPHIPTSRISSGISSHKPSVSYTLA
SPPVRVNSIDILSSITSTGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVSVVNSLGL
NNCRTEKDKSSLECLSQQLSVRQSDDGKLGHTMMDFNLSGDSDGSAGVSESRIYRESRGR
GSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQ
ARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEMRQYFNVGQQAQIP
ITTTSVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMQVIQSTYSLKGDEPHIKVEAPND
DINGEIYDEYDEEDDPDVDYGSDSEHHRTEQTN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggacagtggacggcggcatagacggtcaccaggtgctggagacattacaggtt
cccttcaagcaatcagaggtggcatcggtgacaaagggatattgtgctgggttcagcatg
ctcactgagccagacgttcctccggagtttgaaaggatgtcttccaagcgaccagcctct
ccgtatggggaagcagatggagaggtagccatggtgacaagccggcagaaaatggaagac
gaggagagtggaggcctcgcagcctttcaccttcccctgcacgccagtttccccaataag
actcagtcggaggaatttcaggcagtttctctgttgacgcaagacacctgcgaccacagg
agtcccacgtaccaacacaactcaatggatatagacggcaataaggcggtctcttcattt
gcccctcaaaactcagctacctcacccctgaaggcagatgaaggtgggagacagagcggt
gaatccttgtctaacaccgcattggggacccctgaaaggcgaaaaggtagcttagccgac
gtggtggactcactgaagcaacggaaaatggaggagctgatcaaaagcgaaccagaagaa
acacccagcattgagaagctcctgtctaaggactggaaggacaagctcctcgctatggga
tcagggaacctgggcgacataaaagggactccagaaagcctagcggagaaggagcgccag
ctcatgggaatgataaaccagctcaccagtctgcgagaacagctgctggcagcgcatgac
gagcagaaaaaacttgcagcttcacagatcgagaaacagcggcagcagatggaactggcc
aaacagcagcaagaacagattgcaagacaacagcagcagctcctgcagcagcagcataaa
atcaacctgctccaacagcaaatacaggtccagggtcagctgccccccctaatgatccca
gtgttccctcccgaccagaggacgttagcagctgctgcagccgctcagcaaggctttctc
atccctcctggatttagctataaggccggatgcagtgacccttaccctttacagctgatt
ccaaccaccatggcagcagctgccgccgccgccgccacaccgggtataggacctcttcag
ctacagcaattttatgccgcacagctcgctgccatgcaggtgtctccggggaacaagatg
cctggtatgccgcaggggaacctcgctgctatgtctccaacaagtatgaacacagagaag
agtacgagcagcccgccgcccaaaaacaaggatgatgttacacagccgctgaacctttct
gccaggcccaagacatcagacagaaaatcacccgcatcacccgcctcaccgcacatccca
acgtcgaggataagcagcgggattagttcacacaaaccgtccgtctcctacacgctcgcc
agcccgcccgtcagagttaattctatagatatcctctcctccatcacatcaacgggttac
ttaaacgaccacgacgccgtgaccaaggcaatccaagaagcgcggcagatgaaggagcag
ctgaggcgggagcagcaggtcctggatgggaaggtgtccgttgtcaatagccttggcctg
aacaactgccggacagagaaggataaatcctcgttagaatgtctgtcgcagcagctctca
gtgcggcagagtgatgatgggaagctcggtcataccatgatggacttcaacttgagtgga
gactctgacggaagtgctggagtgtcagaatctagaatatatcgggagtcccgaggacgt
ggaagcagtgagccgcatattaaacggccaatgaacgccttcatggtctgggcaaaagac
gagcgcagaaaaatccttcaggctttccccgatatgcataactcaaacatcagcaagata
ttaggatctcgctggaaagccatgacaaatctagagaagcagccatactatgaggagcag
gcccgactcagcaagcagcacctggagaagtatccggactacaagtacaagccacggccg
aaacgcacatgtctcgtagatggcaaaaaactgaggatcggtgaatataaagcgatcatg
aggagcagacgacaggagatgagacagtattttaatgttggccaacaagcacagatccca
atcaccacgacgagtgttgtttacccaggagccatagctatggcaggaatgccttcaccc
cacttaccctctgaacattcgagtgtctcaagtagccccgaaccaggcatgcaagtcatc
caaagcacttacagcttaaaaggagatgaacctcacatcaaggtggaagctccaaacgac
gacatcaatggtgaaatatatgatgagtacgatgaggaggacgacccagacgtggattat
ggcagtgacagtgaacatcacagaacggagcagaccaactga
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