Bufo bufo (common toad): 121005075
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Entry
121005075 CDS
T07950
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
121005075 (DHX35)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121005075 (DHX35)
Spliceosome [BR:
bbuf03041
]
Complex C
Other components
Complex C specific factors
121005075 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
ABC_tran
AAA_19
Cas3-like_C_2
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121005075
NCBI-ProteinID:
XP_040293533
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Position
6:complement(339409587..339452064)
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AA seq
701 aa
AA seq
DB search
MAAPVGPVRFWKPGTEGPGASLAEERPSNAEVSSVIYNPHASLSIEQQRQKLPVFKLRNH
ILYLVENYQTVVIIGETGCGKSTQIPQYLTEAGWTAEGRVVGVTQPRRVAAVSVAGRVAE
ERGALLGHEVGYCIRFDDCTDPQTTRIKFLTDGMLVREMMSDPLLTRYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFKAFFNQNDTSDPSRDTCAILTVEGRT
FPVDIFYTQSPVPDYMKSTVQTVMKIHQSDLEGDVLAFLTGQEEVESVVSMLVEQARSLA
RSGMKKHLRVLPMYAGLPASEQMKVFERAPHSVRKVVVATNIAETSITINRITFVVDCGF
VKLRAYDPKRAVESLVLVPVSQASASQRAGRSGRNRSGQCYRLYTEEDFQKLPPSTVPEM
QRSNLAPVILQLKALGIDNVLRFHFLSPPPAQSMVQALELLYALGGLDKHCRLTEPLGVR
MAEFPLNPMFAKMLLESGNFGCSAEILSIAAMMQIQNIFVVPPNQKAQATRELRKFAVEE
GDHLTMLNVFEAFIKFNKSSQWCQQHFLNYKGLMRAVTVREQLKKLLSKFKVPKISSEGD
PDPILRCIVAGFFANAAKLHSTGAYRTLRDGHELHIHPTSVLYAEKPPNWVLFSEVIQTN
KYYMRDVTAVESAWLLELAPHFYQQGTHLSRTRKRAKLDNL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgggaccggtgcgcttctggaagccgggtactgaaggcccaggagca
agccttgcggaggagaggccgagcaatgccgaggtgtcatccgtcatctataacccacat
gcttccctttccattgaacagcagaggcagaaattgcctgtatttaagctcagaaatcac
atcctttacctggtggaaaattaccaaactgtggtgattattggagaaactggatgcggg
aaaagcacacaaataccacagtacctgacagaagctggatggacggcagaaggaagagtc
gtcggcgtgacccagcctcgcagggtggcagcagtttcggtggcagggagagtggcagaa
gaacgcggagccctgcttggacatgaagttggctactgtataagatttgacgattgtact
gaccctcaaaccacacgtatcaagtttctgaccgatggtatgctggtccgagaaatgatg
tcggatccactgctcaccagatacagtgtactgatgttggatgaggcccatgaacggaca
ctgtacactgacatcgctattggccttctgaaaaagattcaaaagaaacgaggagacctg
agactgattgtggcctcggcaacactggacgcagagaaattcaaggctttcttcaaccag
aatgacactagtgaccccagcagagacacatgcgctatcttaactgtggagggaaggacg
ttcccagttgacattttctatacacagagccctgttccggattacatgaagtctacagtg
cagacagtcatgaagatccaccagagtgacttggagggtgacgttcttgctttccttaca
ggccaggaagaagtggaaagtgtggtgtccatgttggttgagcaggcccgtagtcttgct
cgctcaggcatgaagaagcacctacgcgttctccccatgtacgctggactccctgcttca
gaacagatgaaggtgtttgagagagccccccacagtgttcgaaaggtagttgttgccacg
aacattgcagagacatccatcactataaacaggatcacctttgttgtagactgcggtttc
gttaagctgcgagcatatgaccccaagcgtgcggtggaatcactggttttagttcctgtt
tcacaagcatcagccagtcaaagagctggacgcagcgggaggaaccggtctggacaatgc
tataggttatatacagaggaggatttccaaaagcttcctccttccacggtcccagagatg
cagaggagtaacctggcgccggtcatccttcagctgaaggcccttgggattgacaatgtc
ctgcgcttccacttcttgtcgccgcccccagcacagtccatggttcaggccttggaactt
ctgtatgcgctcggaggcttggacaagcactgtcgtttgactgagccacttggtgtaaga
atggcagagtttccacttaacccaatgttcgccaagatgctgctggagtcgggtaatttt
ggatgttcggctgaaattttaagcattgcagcaatgatgcagattcagaatatctttgtt
gttcctccaaaccagaaagctcaagcaacaagagaacttcgaaagtttgcggtggaagag
ggagaccacctgacgatgttaaatgtgtttgaggcttttatcaagtttaacaagagctca
cagtggtgtcagcagcactttctcaactacaaggggcttatgagagcggtcactgtgcgg
gaacaactgaagaagcttctcagcaagtttaaagtacccaagatatctagtgaaggagat
ccagatcccattttacgttgtatagtcgctggtttctttgccaatgctgccaagcttcat
tccacaggcgcctacaggacattaagagacggtcatgaattacatatacatccaacatca
gttctatatgccgagaagcctccaaactgggtgctattcagtgaggtgatccagaccaac
aagtactacatgcgggatgtgactgcagtcgagtcagcatggctgctggagctggccccg
cacttttatcagcagggaacgcatctatctcgaaccaggaaaagggccaagctggacaat
ttgtaa
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