Bufo bufo (common toad): 121005221
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Entry
121005221 CDS
T07950
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbuf03016
]
121005221 (TRUB1)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121005221 (TRUB1)
Transfer RNA biogenesis [BR:
bbuf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121005221 (TRUB1)
Prokaryotic type
121005221 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
121005221
NCBI-ProteinID:
XP_040293758
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All DBs
Position
6:complement(6669850..6680877)
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AA seq
278 aa
AA seq
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MAAEKASRLLSLNGLFPVYKPPGVTSAQTLNDLKSRLLRGQPRGSQAGLKEFTKRKKQTL
KIGHGGTLDSTASGLLVVGVGEGTKMLGAMLTGSKKYMTTGQLGKATDTLDASGTVTQEK
PYDHITREELEKALERFTGNTLQVPPLFSALKKNGKRLSCLVRSGAEVEAKPARPVVVYS
LTLTDFRPPLFTLCVECGGGFYVRSLIRDIGEALSSCASVNELIRTKQGPFTLDDDTLRE
DRWDLEHVARALQTSTPPPEQASKRLKTEEDGAPAVQS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagaaagcttctaggctgttgtcactgaacggtctgttcccggtgtataag
ccgccgggtgtcacgtcagcccagaccctcaacgacctgaagagccgcctgctgagaggt
cagccccggggcagccaagccgggctgaaagaatttacgaagagaaagaagcagacgctg
aaaattggccatggagggaccctggacagcacggcgtccggactgctggtggtcggtgtc
ggagaaggtaccaagatgttaggggcgatgctgaccgggagtaagaaatacatgaccacc
gggcagctggggaaagccaccgacaccctggacgcatctgggactgtgacacaagagaag
ccttacgatcacatcactagagaagaattggagaaggcgctggagaggttcaccgggaac
accctgcaggtgcctccactcttctccgccttgaagaagaacgggaagaggttgtcgtgt
ctggtgagatcaggggctgaggtggaggcgaagccggcgcgccctgtggtggtctacagc
ctgacgctgacggatttccggcctcctctctttactctctgtgtggagtgtggaggcggc
ttctatgtccggagtctaatcagagacatcggagaagctttgtccagttgtgccagtgtg
aatgagctgatccgcaccaagcaggggccgttcaccctggacgatgacaccctgagggag
gatcgctgggaccttgagcatgtcgcccgggcactgcagacgtccaccccacccccagag
caagcgtccaagaggctgaagactgaggaggacggggcgcccgctgtccaatcctaa
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