Bufo bufo (common toad): 121005234
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Entry
121005234 CDS
T07950
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
121005234 (ZSWIM8)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121005234 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
121005234
NCBI-ProteinID:
XP_040293782
LinkDB
All DBs
Position
6:260524145..260658265
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AA seq
1829 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GFVNPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMLSPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCSHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTEQCLTYEQITGWWYNVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIENVKRGQHKKSLDKLFQGFKPAVEACYFNWEEAY
PISGITYCSSDKKNSFCWVKAFQQRTCRLQCSEAVCEGGRAQGHESCLLFGERSRPSSQE
MSVRPKELVGKRKVASEVPQRVLRRLSTEGGEKAIYKSTVNKTKLPASKCLANKHSGKRR
MSSEDSSLEPDMAEMSLDDSSLALGAEASNTFSFIESPLSRCYRDNFEDEGGVYYSEGLE
STVIVSAAVPKPDAGVETSAANGSGEGDSIVADDEERGSLKVEAVAEDGAVGGGAGHSKA
PEEGKSREKGEDDDYQAYYVNPQETAKNEDEKAEEGTEEQDIFAGIKPLDQENRMEVLFA
CAEALYAHGYSSEACCLTVELAHDLLANPPDLKVEQPPTKGKKNKVSTSKQTWIATNTLS
KAAFLLTVLSERQEYHNLAFCIGMFALELQRPPASTKALEVKLAYQESEIVSLLKKIPLD
VNEMNTIRGRAKDLRDGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMP
GDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDK
LLDRESQTHKPQTLSSFYSSSKPTTASQKSPSKHASQSTTAIIISGSPATHQQPGVSTAV
HGGITENFSEKNTQDSSQKTSNEPVEAQVYKQEGKVPSRLALGNRGGYNGRCWGSPVRQK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWGATPWGRGQDSDSISSSSSDSLGSSSS
SGSRRASGGARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSS
TSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAME
IGSAALNILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEI
QRALVQCKEQDNLMLEKACMAVEDAAKGGGVYPEVLFEVAHQWYWLYEQMMGGTPAQREG
ATGCSTGGARSVSEMVRGLTDSRIIPETSTVTVATAVTAATVVPVISVGSTIYQQHTAMA
HAHSQGLHPYTTLQTHIPTVCTPQYIGIPRQQMPQPTVFPVPGTLYTQGVHPAFIGAQYP
YTVTTPSIAATAVSFPGAPVPSMTQIAVHPYHTEAGLSLTSNVAIGSVHTGTTFPAIPGT
SLTTLTTQPAQLVTGSFPVEDEQHSQPVSPQCLHYLHSAYRVGMLALEMLGRRAHNDHPN
NFSRSPPYTEDVKWLLSLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHI
HNHLRTPAFHQLVQRCQQSYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPLGAMQF
NDILQNLKRGKQTKELWQRVSLEMATYSP
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggcgagaggttttcttttgaggactcggat
cggtttgaagaggactccttatgctcttttatctcggaggcggaaagtctctgccagaat
tggagaggatggcgcaaacagtcagcagggcccaactcccctacagtcaaaatgaaagat
ggatttgtgaatccactagtggaactgtctgccaaacaagtagcgtttcacattccattc
gaagtggtcgaaaaggtttaccccccagttccagagcagctacaactacgaattgcattc
tggagcttcccagagaatgaagaggatataaggttgtattcatgcttggcaaatggcagt
gccgatgagttccagagaggagaacagctgtttcgtatgagagccgtgaaggaccctcta
cagataggtttccacttgagtgccactgtggtccccccgcaaatgctttctcctaaaggc
gcctacaatgtggctgtgatgtttgaccgttgccggatcacgtcgtgcagctgtacctgt
ggagcaggagcaaagtggtgctcgcatgttgtggccctctgtctctttaggatacacaac
gcatcagcagtctgtctgcgagctccagtttcggagtccctgtccaggcttcagagggat
cagctgcagaagtttgcgcagtacctcatcagcgagctgccacagcagatcctgcccact
gctcagcgtcttctggatgaattactgtcttcacagtcaactgccataaacacagtgtgt
ggagccccagatcccacagctggaccctctgcctctgaccagagcacttggtacctggat
gaatccactttgagtgataacataaagaagacgctccataagttttgtggcccttctcct
gttgttttcagtgatgtcaattccatgtatctatcatctactgagccacctgctgcagca
gaatgggcttgtctcctgcgccctttaagaggaagggaaccagaaggtatttggaatctt
ctgtccattgttcgtgagatgttcaagagacgggacacgaatgcagcccccttactggag
atcctcactgaacagtgtctgacgtatgagcagataacaggttggtggtacaatgtgcga
acatcagcatcccatagcagtgctagtggacatacaggtcgcagcaatggacagtcagaa
gttgctgctcatgcctgtgctagtatgtgtgatgaaatggttgtcctatggagattagca
gttttagatcctaccatcagcccacaaagacgacgggacctctgttctcagttacgtcag
tggcaactaaaagtcattgagaatgtgaagaggggccagcataaaaagtctctagacaaa
ctcttccaaggttttaaaccagcagtagaggcatgctatttcaattgggaagaggcatat
cccatttcaggaatcacttattgcagcagtgacaagaagaactctttttgttgggtcaaa
gcgtttcaacagagaacctgccgactgcagtgttctgaggcggtatgcgaaggtggacgt
gcacaagggcatgaaagctgcctactctttggagaacggtcacgtccttcttcccaggaa
atgtctgtacgccccaaggagcttgtgggcaaaaggaaagtggcatctgaagtacctcaa
agagtacttaggagactttctacagagggtggagagaaagctatatataaatctacagtc
aacaaaacaaaattaccagcaagtaaatgtctggccaacaagcacagtggaaagcgtcga
atgagtagtgaagatagttctctagaaccagacatggctgaaatgagtcttgatgatagt
agcttggcacttggtgctgaagccagtaatactttcagcttcattgaatctcctctaagt
agatgttacagggacaactttgaggatgagggtggtgtttactattcagaaggtctagag
tctactgtcattgtaagtgctgcagtgcctaaacctgatgcaggtgtggaaacatctgct
gctaatggcagtggagaaggggattcaattgttgcagatgatgaggagagaggaagcctg
aaggtagaggcagtggcagaagatggagcagtgggtgggggtgcaggacacagcaaagca
ccagaagaaggtaagagtcgtgaaaagggtgaggatgatgactatcaagcctactatgta
aacccacaagagacagctaaaaatgaagatgagaaagcagaggaaggaacagaagaacag
gatatatttgcaggaataaagcctctggaccaggaaaacagaatggaggtattgtttgct
tgtgctgaggctctgtatgctcatggatacagcagtgaagcatgctgtcttacagtggaa
ctagcacatgatctattggctaatcctcctgacctcaaggttgagcagcccccaaccaag
ggtaaaaaaaacaaagtttcaactagtaagcagacgtggatagcaacaaacacattgtcc
aaagcagccttccttctgactgtgctaagcgagcggcaggaataccacaacctggccttc
tgtattggaatgtttgccctggagcttcagagaccccctgcttccaccaaagcattagag
gtaaagctggcataccaagaatctgagattgtctcccttttaaagaagattcctttagac
gtcaatgaaatgaacactattcgtggacgagctaaggatttacgagatggcacactgtgt
gactatcggcctgtgcttcctcttatgctggccagttttatatttgatgtcctttgtaca
ccagtggtatccccaacaggttcccgtcctccaagtcgtaaccgtaacaacgagatgcct
ggggatgaagagctgggctttgaggcagctgttgctgcgctaggcatgaagaccacagtc
agtgaagcagagcatcctttgctttgtgagggaaccagaagagagaagggtgatttggca
ctagctctaatgattacctacaaagatgatcaatcaaagctgaaaaagatattggacaag
ctgttggatcgtgaaagtcaaactcacaaacctcaaactcttagttccttctactcttcc
agtaaaccaacaacagccagtcaaaagtctccctccaaacatgcctcccagtccacaaca
gccattataatatcaggtagcccagccacgcaccagcagccaggtgtgagcaccgcggtc
catggagggattactgaaaacttctctgagaagaacacacaggatagttcccagaaaaca
agcaatgaaccggtggaagcacaagtgtacaaacaggaaggaaaagtaccaagccgtctg
gcactgggaaaccgaggaggatataatgggaggtgctggggttcaccagtgcgtcagaaa
aaaaagcacacagggatggctagcattgacagcagcgcgccagaaactacatctgacagc
tccccaacacttagtcgccgaccacttcgtggtggttggggtgctactccttggggacga
gggcaggacagtgatagtatcagcagctcctcaagtgattcacttggttcatcatcgtct
agtgggagcaggagggcaagtggtggagccagagccaagacggtagaagttggaagatac
aaaggccgtcgtttggagagccatgctccccatgtccctaatcaaccctctgaagcagct
gcccacttctattttgagctggccaagactgtcctcatcaaagctggtgggaacagcagc
acatccatctttacacatccatcctccagcggtggacaccaagggccccatcgcaacctg
cacctctgtgcctttgagataggtctctatgccctgggcctacacaattttgtgtctcca
aactggctgtctagaacctactcttcacacgtctcctggataactgggcaggcaatggag
attggaagtgcagcactaaatattcttgtggagtgctgggatggccatctcactccacca
gaggtagcctctttggcagacagggcttcccgagctagagattccaatatggttcgagca
gcggcagaactggctctgagctgcctccctcatgcacatgcattgaaccccaatgagatc
cagagagctctggtgcagtgcaaagagcaggataacctgatgctagagaaggcttgcatg
gcagtggaggacgcagctaaaggaggaggtgtttaccctgaagtcttatttgaagtggct
catcagtggtattggctgtatgagcaaatgatgggtggcactccagcgcaaagagaagga
gctactggctgcagtacaggaggtgctcgttcggtgtccgagatggtgcgtggacttaca
gacagcaggataataccggagacctccactgtgactgtggcaactgcagtgactgctgca
accgtagtcccggtgatatcagttgggtcaacgatctaccagcagcatacggcaatggct
catgcacacagccagggactacacccttatactactctccagacacacatacccactgtg
tgtactccacagtacattggaatccctcgtcagcaaatgccacagccaacagtcttccca
gttcctggaacattgtacacacagggcgttcatccagcgttcattggagcccagtatccc
tacacagtaacaactccttctattgcagctacagctgtgtcttttccgggggctcctgtc
ccttcaatgacacagattgctgtccatccttatcatacagaagcagggctgtcgctaaca
tccaacgtagcaatagggagcgttcacacaggaactacatttccagcaatccctggcact
agcctgacaacactaaccactcaacccgcccagctggttacagggagcttccctgtggag
gatgagcagcacagtcagcccgtcagcccccagtgcttacactacctccactctgcctat
cgtgttgggatgctggcattagagatgttgggtcgtagagcccacaatgaccaccccaac
aacttctccagaagccccccatacactgaggacgtcaagtggctgctgagtctagctgcc
aagttaggtgtgaattacgtgcaccagttctgcgtcggagcagccaaaggtgtgctgagc
ccattcgtactacaggagattattatggaggcacttcagcggcttaaccctgcccacatc
cataaccacctgcgtacccctgccttccatcagctggtgcagcgctgtcagcagtcttac
atgcagtacattcaccatcgtttaatacatcttaccccagcggactatgatgactttgta
aacgccattcgcagcgcaaggagtgcattttgcctcacccctttaggagccatgcagttc
aatgacattctacagaatctgaagagaggcaaacagaccaaggagctatggcagagggtg
tccctggaaatggccacatattctccttga
DBGET
integrated database retrieval system
